model

Pre-trained Models

BiomedNLP-PubMedBERT

git clone https://huggingface.co/microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext

config.json
flax_model.msgpack
pytorch_model.bin
tokenizer_config.json
vocab.txt

config.json

{
  "architectures": [
    "BertForMaskedLM"
  ],
  "model_type": "bert",
  "attention_probs_dropout_prob": 0.1,
  "hidden_act": "gelu",
  "hidden_dropout_prob": 0.1,
  "hidden_size": 768,
  "initializer_range": 0.02,
  "intermediate_size": 3072,
  "max_position_embeddings": 512,
  "num_attention_heads": 12,
  "num_hidden_layers": 12,
  "type_vocab_size": 2,
  "vocab_size": 30522
}

Biobert

git clone https://huggingface.co/dmis-lab/biobert-v1.1

config.json
flax_model.msgpack
pytorch_model.bin
special_tokens_map.json
tokenizer_config.json
vocab.txt

config.json

{
  "architectures": [
    "BertModel"
  ],
  "attention_probs_dropout_prob": 0.1,
  "gradient_checkpointing": false,
  "hidden_act": "gelu",
  "hidden_dropout_prob": 0.1,
  "hidden_size": 768,
  "initializer_range": 0.02,
  "intermediate_size": 3072,
  "layer_norm_eps": 1e-12,
  "max_position_embeddings": 512,
  "model_type": "bert",
  "num_attention_heads": 12,
  "num_hidden_layers": 12,
  "pad_token_id": 0,
  "type_vocab_size": 2,
  "vocab_size": 28996
}