version bump 0.9.2

ritamtbsilva · ritamtbsilva · commit 9ad3cb403094 · 2025-07-23T17:07:10.000+01:00
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: markeR
 Title: An R Toolkit for Evaluating Gene Signatures as Phenotypic Markers
-Version: 0.99.1 
+Version: 0.99.2 
 Authors@R: 
     c(
       person("Rita", "Martins-Silva", 
diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,7 @@
+# markeR 0.99.2 (23 Jul, 2025)
+
+* Minor fixes in documentation
+
 # markeR 0.99.1 (23 Jul, 2025)
 
 * Fix documentation (invalid characters, deep nesting, missing value in data)
diff --git a/README.Rmd b/README.Rmd
@@ -31,7 +31,7 @@ knitr::opts_chunk$set(
 
 > **To cite markeR please use:** 
 >
->   Martins-Silva R, Kaizeler A, Barbosa-Morais N (2025). _markeR: an R Toolkit for Evaluating Gene Sets as Phenotypic Markers_. Gulbenkian Institute for Molecular Medicine, Faculdade de Medicina, Universidade de Lisboa, Lisbon, Portugal. R package version 0.99.1, https://github.com/DiseaseTranscriptomicsLab/markeR.
+>   Martins-Silva R, Kaizeler A, Barbosa-Morais N (2025). _markeR: an R Toolkit for Evaluating Gene Sets as Phenotypic Markers_. Gulbenkian Institute for Molecular Medicine, Faculdade de Medicina, Universidade de Lisboa, Lisbon, Portugal. R package version 0.99.2, https://github.com/DiseaseTranscriptomicsLab/markeR.
  
 `inst/Paper/` — Contains all scripts and materials used in the original markeR paper to reproduce analyses and figures.
 
diff --git a/README.md b/README.md
@@ -27,7 +27,7 @@ along with tools to compute performance metrics and visualize results.
 > Martins-Silva R, Kaizeler A, Barbosa-Morais N (2025). *markeR: an R
 > Toolkit for Evaluating Gene Sets as Phenotypic Markers*. Gulbenkian
 > Institute for Molecular Medicine, Faculdade de Medicina, Universidade
-> de Lisboa, Lisbon, Portugal. R package version 0.99.1,
+> de Lisboa, Lisbon, Portugal. R package version 0.99.2,
 > <https://github.com/DiseaseTranscriptomicsLab/markeR>.
 
 `inst/Paper/` — Contains all scripts and materials used in the original

Original file line number	Diff line number	Diff line change
`@@ -31,7 +31,7 @@ knitr::opts_chunk$set(`
`31`	`31`
`32`	`32`	`> To cite markeR please use:`
`33`	`33`	`>`
`34`		`-> Martins-Silva R, Kaizeler A, Barbosa-Morais N (2025). _markeR: an R Toolkit for Evaluating Gene Sets as Phenotypic Markers_. Gulbenkian Institute for Molecular Medicine, Faculdade de Medicina, Universidade de Lisboa, Lisbon, Portugal. R package version 0.99.1, https://github.com/DiseaseTranscriptomicsLab/markeR.`
	`34`	`+> Martins-Silva R, Kaizeler A, Barbosa-Morais N (2025). _markeR: an R Toolkit for Evaluating Gene Sets as Phenotypic Markers_. Gulbenkian Institute for Molecular Medicine, Faculdade de Medicina, Universidade de Lisboa, Lisbon, Portugal. R package version 0.99.2, https://github.com/DiseaseTranscriptomicsLab/markeR.`
`35`	`35`
`36`	`36`	`inst/Paper/` — Contains all scripts and materials used in the original markeR paper to reproduce analyses and figures.
`37`	`37`