user-guide/model_publishing.html at main · EBI-BioModels/user-guide · GitHub

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<!DOCTYPE html> <!-- saved from url=(0032)http://localhost:8080/jummp/help --> <html><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"> <meta charset="utf-8"> <!-- Use the .htaccess and remove these lines to avoid edge case issues. More info: h5bp.com/b/378 --> <!-- <meta http-equiv="X-UA-Compatible" content="IE=edge,chrome=1"> --> <!-- Not yet implemented --> <title>DDMoRe Model Repository Help</title> <link rel="shortcut icon" href="http://www.ddmore.eu/sites/ddmore/themes/ddmore/favicon.ico" type="image/vnd.microsoft.icon"> <meta content="About DDMoRe" about="http://www.ddmore.eu/content/about-ddmore" property="dc:title"> <link rel="stylesheet" href="./img/ddmore/ddmore.css"> <!--[if lte IE 7]> <link type="text/css" rel="stylesheet" href="http://www.ddmore.eu/sites/ddmore/files/css/css_sIsRwCKuAMZS6YJIMFqPXNCtZHxV56wN2ePifCvkLYc.css" media="all" /> <![endif]--> <!--[if lte IE 6]> <link type="text/css" rel="stylesheet" href="http://www.ddmore.eu/sites/ddmore/files/css/css_N0EHcRmGNgF6d_odKVbSBNnBtfyz9Ndtm25vvkPxWcQ.css" media="all" /> <![endif]--> <meta name="layout" content="main"> <style type="text/css"></style> <script src="https://code.jquery.com/jquery-2.1.0.min.js" type="text/javascript" charset="utf-8"></script> <script src="http://cdnjs.cloudflare.com/ajax/libs/underscore.js/1.6.0/underscore-min.js" type="text/javascript" charset="utf-8"></script> <script src="http://cdnjs.cloudflare.com/ajax/libs/backbone.js/1.1.2/backbone-min.js" type="text/javascript" charset="utf-8"></script> <script> var AppRouter = Backbone.Router.extend({ routes: { "contextSpecific/:id": "contextSpecific" } }); var app_router = new AppRouter; var resize=false; var width=0; app_router.on('route:contextSpecific', function (id) { resize=true; width=id; }); function performContextChanges() { if (resize) { console.log("resizing to "+width); $('#content img').css({ width: width , 'height' : 'auto' }); $('#block-system-main').css({ 'overflow-wrap': 'break-word', width: width }); $('img').click(function(){ var linkLoc=$(this).attr("src"); if (linkLoc.indexOf("logo")==-1) { var win=window.open($(this).attr("src"), '_blank'); $(this).prop("title","Click to open in a new tab"); $(this).css( 'cursor', 'pointer' ); win.focus(); } }); } } Backbone.history.start(); $(window).resize(function() { width=$(this).width(); performContextChanges(); }); $(document).ready(function() { if (resize) { $('a').click(function(event) { event.preventDefault(); event.stopPropagation(); console.log("CAUGHT CLICK EVENT"); var original=$(this).prop("href"); window.location=original+"#contextSpecific/"+width; }); } performContextChanges(); }); </script> </head> <body style=""> <div id="header-full"> <div id="header"><div class="section clearfix"> <a href="manual.html" title="Home" rel="home" id="logo"><img src="./img/ddmore/logo.png" alt="DDMoRe Logo"></a> </div> </div> </div> <div id="center-full"> <div id="page-wrapper"> <div id="center-background">&nbsp;</div> <div id="center-backgroundright">&nbsp;</div> <div id="page"> <div id="main-wrapper"><div id="main" class="clearfix"> <div id="content" class="column"><div class="section"> <a id="main-content"></a> <h1 class="title" id="page-title"> Model Publishing </h1> <div class="region region-content"> <div id="block-system-main" class="block block-system first last odd">
<p>When models are created in the DDMoRe Model Repository, they are visible only to the user creating it, and those with admin rights.</p> <p>Users of DDMoRe Model Repository are able to publish their own models, subject to the latter</p> <ul> <li>containing all mandatory annotations required by DDMoRe.</li> <li>complying with the guidelines described at the start of the submission process</li> </ul> <p><img alt="model display" src="img/ddmore/display1.png" /></p> <p>When the user clicks on the unlock button, a confirmation prompt is shown. Models once published cannot be unpublished, and therefore care must be taken when taking this step. If the user decides to proceed with publishing the model, the status is changed to published, and the user is taken to the published version of the model.</p> <p>It is possible to update a published model. Updated versions of the model are not published until the user decides to do so. Until then, only the published version of the model is visible to unauthenticated users, and the most recent version is accessible to users that own the model or those with admin rights.</p>
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