biosamples-search/docker-compose.yaml at main · EBIBioSamples/biosamples-search · GitHub

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services:
#  biosamples-search:
#    build: .
#    image: biosamples-search:latest
#    ports:
#      - "8080:8080"
#      - "9090:9090"
#    environment:
#      - spring.elasticsearch.username=elastic
#      - spring.elasticsearch.password=elastic
#      - spring.elasticsearch.uris=http://elastic:9200
#    links:
#      - elastic
  setup:
    image: docker.elastic.co/elasticsearch/elasticsearch:${STACK_VERSION}
    user: "0"
    command: >
      bash -c '
        if [ x${ELASTIC_PASSWORD} == x ]; then
          echo "Set the ELASTIC_PASSWORD environment variable in the .env file";
          exit 1;
        elif [ x${KIBANA_PASSWORD} == x ]; then
          echo "Set the KIBANA_PASSWORD environment variable in the .env file";
          exit 1;
        fi;
        echo "Waiting for Elasticsearch availability";
        until curl -s http://elastic:9200 | grep -q "missing authentication credentials"; do sleep 30; done;
        echo "Setting kibana_system password";
        until curl -s -X POST -u "elastic:${ELASTIC_PASSWORD}" -H "Content-Type: application/json" http://elastic:9200/_security/user/kibana_system/_password -d "{\"password\":\"${KIBANA_PASSWORD}\"}" | grep -q "^{}"; do sleep 10; done;
        echo "All done!";
      '
    healthcheck:
      test: [ "CMD-SHELL", "[ -f config/certs/es01/es01.crt ]" ]
      interval: 1s
      timeout: 5s
      retries: 120
  elastic:
    image: docker.elastic.co/elasticsearch/elasticsearch:${STACK_VERSION}
    volumes:
      - es_data:/usr/share/elasticsearch/data
    ports:
      - ${ES_PORT}:9200
    environment:
      - node.name=elastic
      - discovery.type=single-node
      - ELASTIC_PASSWORD=${ELASTIC_PASSWORD}
      - bootstrap.memory_lock=true
      - xpack.security.http.ssl.enabled=false
    mem_limit: ${MEM_LIMIT}
    ulimits:
      memlock:
        soft: -1
        hard: -1
    healthcheck:
      test:
        [
          "CMD-SHELL",
          "curl -s http://localhost:9200 | grep -q 'missing authentication credentials'",
        ]
      interval: 10s
      timeout: 10s
      retries: 120

  kibana:
    depends_on:
      elastic:
        condition: service_healthy
    image: docker.elastic.co/kibana/kibana:${STACK_VERSION}
    volumes:
      - kibana_data:/usr/share/kibana/data
    ports:
      - ${KIBANA_PORT}:5601
    environment:
      - SERVERNAME=kibana
      - ELASTICSEARCH_HOSTS=http://elastic:9200
      - ELASTICSEARCH_USERNAME=kibana_system
      - ELASTICSEARCH_PASSWORD=${KIBANA_PASSWORD}
    mem_limit: ${MEM_LIMIT}
    healthcheck:
      test:
        [
          "CMD-SHELL",
          "curl -s -I http://localhost:5601 | grep -q 'HTTP/1.1 302 Found'",
        ]
      interval: 10s
      timeout: 10s
      retries: 120
  rabbitmq:
    image: rabbitmq:3.10.7-management-alpine
    mem_limit: 1g
    hostname: search-rabbitmq
    ports:
      - 5672:5672
      - 15672:15672
    volumes:
      - rabbitmq_data:/var/lib/rabbitmq/mnesia

volumes:
  es_data:
    driver: local
  kibana_data:
    driver: local
  rabbitmq_data:
    driver: local