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{2023.06}[2023a,a64fx] add remaining apps originally built with EB 4.9.0
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‎easystacks/software.eessi.io/2023.06/a64fx/eessi-2023.06-eb-4.9.4-2023a.yml‎

Lines changed: 103 additions & 7 deletions
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@@ -14,14 +14,15 @@ easyconfigs:
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# originally built with EB 4.8.2; PR 19270 included since EB 4.9.0
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# - pybind11-2.11.1-GCCcore-12.3.0.eb:
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# # avoid indirect dependency on old CMake version built with GCCcore/10.2.0 via Catch2 build dependency;
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19270
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19270
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# from-pr: 19270
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- pybind11-2.11.1-GCCcore-12.3.0.eb
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# the package SciPy-bundle itself has to be rebuilt; here we use the commit to add the dependency
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# Cython; PR 21693 is included since EB 5.0.0
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# - SciPy-bundle-2023.07-gfbf-2023a.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/21693
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# from-pr: 21693
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- SciPy-bundle-2023.07-gfbf-2023a.eb:
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options:
@@ -48,31 +49,35 @@ easyconfigs:
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# originally built with EB 4.8.2; PR 19268 included since EB 4.9.0
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# - TensorFlow-2.13.0-foss-2023a.eb:
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# # patch setup.py for grpcio extension in TensorFlow 2.13.0 easyconfigs to take into account alternate sysroot;
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19268
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19268
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# from-pr: 19268
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- TensorFlow-2.13.0-foss-2023a.eb
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- X11-20230603-GCCcore-12.3.0.eb
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# originally built with EB 4.8.2; PR 19339 included since EB 4.9.0
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# - HarfBuzz-5.3.1-GCCcore-12.3.0.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19339
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# from-pr: 19339
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- HarfBuzz-5.3.1-GCCcore-12.3.0.eb
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- Qt5-5.15.10-GCCcore-12.3.0.eb
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- OSU-Micro-Benchmarks-7.1-1-gompi-2023a.eb
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# originally built with EB 4.8.2; PR 19363 included since EB 4.9.0
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# - LHAPDF-6.5.4-GCC-12.3.0.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19363
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# from-pr: 19363
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- LHAPDF-6.5.4-GCC-12.3.0.eb
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# originally built with EB 4.8.2; PR 19397 included since EB 4.9.0
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# - LoopTools-2.15-GCC-12.3.0.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19397
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# from-pr: 19397
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- LoopTools-2.15-GCC-12.3.0.eb
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# originally built with EB 4.8.2; PR 19185 included since EB 4.9.0
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# - R-4.3.2-gfbf-2023a.eb:
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# options:
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# # https://github.com/easybuilders/easybuild-easyconfigs/pull/19185
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# from-pr: 19185
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- R-4.3.2-gfbf-2023a.eb
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# originally built with EB 4.8.2; source URL has changed recently
@@ -87,16 +92,19 @@ easyconfigs:
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# originally built with EB 4.8.2; PR 19455 included since EB 4.9.0
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# - ALL-0.9.2-foss-2023a.eb:
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# options:
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# # https://github.com/easybuilders/easybuild-easyconfigs/pull/19455
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# from-pr: 19455
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- ALL-0.9.2-foss-2023a.eb
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# originally built with EB 4.8.2; PR 19735 included since EB 4.9.1
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# - CDO-2.2.2-gompi-2023a.eb:
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# options:
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# # https://github.com/easybuilders/easybuild-easyconfigs/pull/19735
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# from-pr: 19735
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- CDO-2.2.2-gompi-2023a.eb
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# originally built with EB 4.8.2; PR 19820 included since EB 4.9.1
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# - BWA-0.7.17-20220923-GCCcore-12.3.0.eb:
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# options:
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# # https://github.com/easybuilders/easybuild-easyconfigs/pull/19820
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# from-pr: 19820
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- BWA-0.7.17-20220923-GCCcore-12.3.0.eb
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# from here on apps were originally built with EB 4.9.0
@@ -113,14 +121,14 @@ easyconfigs:
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from-commit: e610fe1ac5393d1de668a466fdaaea74c580ee03
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# PR 19592 was included since EB 4.9.1
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# - ESPResSo-4.2.1-foss-2023a.eb:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19592
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19592
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# from-pr: 19592
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- ESPResSo-4.2.1-foss-2023a.eb
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# PR 19679 was included since EB 4.9.1
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# - Rivet-3.1.9-gompi-2023a-HepMC3-3.2.6.eb:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19679
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19679
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# from-pr: 19679
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- Rivet-3.1.9-gompi-2023a-HepMC3-3.2.6.eb
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- Pillow-10.0.0-GCCcore-12.3.0.eb
@@ -150,15 +158,103 @@ easyconfigs:
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from-commit: 0437ff1ad34283398f55d4a6e01e6540b1ae9688
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# PR 19646 was included since EB 4.9.1
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# - snakemake-8.4.2-foss-2023a.eb:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19646
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19646
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# from-pr: 19646
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- snakemake-8.4.2-foss-2023a.eb
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# PRs 19471 and 3036 were included since EB 4.9.1
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# - LAMMPS-2Aug2023_update2-foss-2023a-kokkos.eb:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19471
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# # see https://github.com/easybuilders/easybuild-easyblocks/pull/3036
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19471
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# from-pr: 19471
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# # see https://github.com/easybuilders/easybuild-easyblocks/pull/3036
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# include-easyblocks-from-pr: 3036
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- LAMMPS-2Aug2023_update2-foss-2023a-kokkos.eb
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# PR 19573 was included since EB 4.9.1
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# - PyTorch-2.1.2-foss-2023a.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19573
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# from-pr: 19573
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- PyTorch-2.1.2-foss-2023a.eb
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- matplotlib-3.7.2-gfbf-2023a.eb
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# PR 19554 was included since EB 4.9.1
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# - PyQt5-5.15.10-GCCcore-12.3.0.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19554
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# from-pr: 19554
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- PyQt5-5.15.10-GCCcore-12.3.0.eb
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# PR 19996 was included since EB 4.9.1
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# - Pillow-SIMD-9.5.0-GCCcore-12.3.0.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/19996
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# from-pr: 19996
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- Pillow-SIMD-9.5.0-GCCcore-12.3.0.eb
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- dask-2023.9.2-foss-2023a.eb
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- JupyterNotebook-7.0.2-GCCcore-12.3.0.eb
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# PR 20086 was included since EB 4.9.1
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# - ImageMagick-7.1.1-15-GCCcore-12.3.0.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/20086
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# from-pr: 20086
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- ImageMagick-7.1.1-15-GCCcore-12.3.0.eb
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# PR 20050 was included since EB 4.9.1
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# - Z3-4.12.2-GCCcore-12.3.0.eb:
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# options:
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# # The Z3 dependency of PyTorch had it's versionsuffix removed
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# # and we need to workaround the problem this creates,
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# # see https://github.com/EESSI/software-layer/pull/501 for details
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/20050
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# from-pr: 20050
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- Z3-4.12.2-GCCcore-12.3.0.eb
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# PR 20007 was included since EB 4.9.1
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# - PyOpenGL-3.1.7-GCCcore-12.3.0.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/20007
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# from-pr: 20007
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- PyOpenGL-3.1.7-GCCcore-12.3.0.eb
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- OpenJPEG-2.5.0-GCCcore-12.3.0.eb
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- Highway-1.0.4-GCCcore-12.3.0.eb
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- ELPA-2023.05.001-foss-2023a.eb
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# libxc was handled as follows when building NVIDIA Grace stack
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# - libxc-6.2.2-GCC-12.3.0.eb
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- libxc-6.2.2-GCC-12.3.0.eb:
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options:
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# possible change in gitlabs tarball packaging, affected by .gitattributes
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# https://github.com/easybuilders/easybuild-easyconfigs/pull/22580
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from-commit: 456d64bbeacf465e8f7e7ff378864e26352d045d
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# ParMETIS was handled as follows when building NVIDIA Grace stack
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# (it wasn't listed separately when building stack for Sapphire Rapids)
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- ParMETIS-4.0.3-gompi-2023a.eb:
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options:
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# source URLs for ParMETIS-4.0.3 have changed, corresponding PR is
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# https://github.com/easybuilders/easybuild-easyconfigs/pull/22579
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# ParMETIS-4.0.3 is a dependency of SuperLU_DIST-8.1.2
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from-commit: 977e5208a720f23ace41b83b84da8b717d0aeada
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# PR 20162 was included since EB 4.9.1
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# - SuperLU_DIST-8.1.2-foss-2023a.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/20162
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# from-pr: 20162
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- SuperLU_DIST-8.1.2-foss-2023a.eb
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# PRs 19686 and 3086 were included since EB 4.9.1
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# - PETSc-3.20.3-foss-2023a.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyblocks/pull/3086
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# include-easyblocks-from-pr: 3086
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/20162
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# from-pr: 19686
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- PETSc-3.20.3-foss-2023a.eb
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# PR 20142 was included since EB 4.9.1
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# - MODFLOW-6.4.4-foss-2023a.eb:
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# options:
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# # see https://github.com/easybuilders/easybuild-easyconfigs/pull/20142
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# from-pr: 20142
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- MODFLOW-6.4.4-foss-2023a.eb
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# add all dependencies of R-bundle-CRAN-2023.12-foss-2023a.eb; due to a rebuild we will install the bundle itself with EB 4.9.4
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- NLopt-2.7.1-GCCcore-12.3.0.eb
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- nettle-3.9.1-GCCcore-12.3.0.eb
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- Xvfb-21.1.8-GCCcore-12.3.0.eb
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- libsndfile-1.2.2-GCCcore-12.3.0.eb
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- PostgreSQL-16.1-GCCcore-12.3.0.eb
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- ImageMagick-7.1.1-15-GCCcore-12.3.0.eb
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- GDAL-3.7.1-foss-2023a.eb

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