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Merge branch 'main' into FEniCS
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‎easystacks/software.eessi.io/2023.06/eessi-2023.06-eb-5.1.2-2023a.yml‎

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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/24176
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from-commit: 107ea0ea250d1fd145c92f1d265d372e0ea3e685
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- RDKit-2024.03.3-foss-2023a.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25109
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from-commit: e0c9571b3a64c2abd72a83405405778d45a9733e

‎easystacks/software.eessi.io/2023.06/eessi-2023.06-eb-5.2.0-2023a.yml‎

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easyconfigs:
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- jupyterlmod-4.0.3-GCCcore-12.3.0.eb
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- Graphviz-8.1.0-GCCcore-12.3.0.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25189
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from-commit: 962002ee42d6fc74c981105a79e30b05f37cc1d0
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- aiida-core-2.7.2-foss-2023a.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25113
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from-commit: 077b656e7e9a93aef4a6286aafc57fb5acd7a424
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- aiida-shell-0.8.2-foss-2023a.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25113
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from-commit: 077b656e7e9a93aef4a6286aafc57fb5acd7a424
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- AmberTools-23.6-foss-2023a.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyblocks/pull/4045
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include-easyblocks-from-commit: b0aef6d87f3b102a29f53c875e1c69b789f16a33
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25193
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from-commit: f97ac13b2d4290c505aaa6532fdedebb4f629834
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- OpenBabel-3.1.1-gompi-2023a.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25222
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from-commit: 7dbe8beab98ec0b2daa432aa43ae3a0ed874e859
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- acpype-2023.10.27-foss-2023a.eb
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- AITW-stiffness-1.0.0-foss-2023a.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyblocks/pull/4056
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include-easyblocks-from-commit: 0f75bae68e0323d7053e0e2dddb03e6422e666e2
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25220
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from-commit: fc6e46c10d6c5d92ea2ab403bfcde364828fa693
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- AITW-microstructures-1.0.0-foss-2023a.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyblocks/pull/4056
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include-easyblocks-from-commit: 0f75bae68e0323d7053e0e2dddb03e6422e666e2
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25220
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from-commit: fc6e46c10d6c5d92ea2ab403bfcde364828fa693
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- AITW-viscosity-1.0.0-foss-2023a.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyblocks/pull/4056
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include-easyblocks-from-commit: 0f75bae68e0323d7053e0e2dddb03e6422e666e2
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25220
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from-commit: fc6e46c10d6c5d92ea2ab403bfcde364828fa693

‎easystacks/software.eessi.io/2023.06/eessi-2023.06-eb-5.2.0-2023b.yml‎

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easyconfigs:
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- GROMACS-2024.3-foss-2023b-PLUMED-2.9.2.eb
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- FEniCS-DOLFINx-Python-0.9.0-foss-2023b.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25004
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from-commit: 2ef62609e3e40785dfb28bcb91db143cee5924a5
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from-commit: 2ef62609e3e40785dfb28bcb91db143cee5924a5

‎easystacks/software.eessi.io/2023.06/rebuilds/20260126-eb-5.2.0-hatchling-1.18.0-sapphirerapids-typing-extensions.yml‎

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# 2026.02.03
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# hatchling-1.18.0 rebuild to clean up `typing_extensions` leftover extension in sapphirerapids
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# Previous rebuild PRs seem to have left an old Python extension that is no more needed after
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# the easyconfig was updated: https://github.com/easybuilders/easybuild-easyconfigs/pull/20389
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easyconfigs:
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- hatchling-1.18.0-GCCcore-12.3.0.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/20389
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from-commit: 9580c0d67d6dd97b160b768a839bfcba6d5b21b9
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- hatchling-1.18.0-GCCcore-13.2.0.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/20389
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from-commit: 9580c0d67d6dd97b160b768a839bfcba6d5b21b9

‎easystacks/software.eessi.io/2023.06/rebuilds/20260126-eb-5.2.0-jupyter-server-path_patches.yml‎

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# The current version of jupyter-server on 2023.06 jupyter-server/2.7.2-GCCcore-12.3.0 does not include the patch
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# introduced by https://github.com/easybuilders/easybuild-easyconfigs/pull/19737 to modify the behavior og jupyter
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# to add paths from EB_ENV_JUPYTER_ROOT to JUPYTER_PATH and JUPYTER_CONFIG_PATH.
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easyconfigs:
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- jupyter-server-2.7.2-GCCcore-12.3.0.eb

‎easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.2.0-2024a.yml‎

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easyconfigs:
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- MLflow-2.22.4-gfbf-2024a.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/24951
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from-commit: 0f50e961c55d6406b0e64eebd59335b32dce0e92
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- Flux-0.80.0-GCC-13.3.0.eb
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- WRF-4.6.1-foss-2024a-dmpar.eb
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- buildenv-default-foss-2024a.eb
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- GDRCopy-2.4.1-GCCcore-13.3.0.eb
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- lit-18.1.7-GCCcore-13.3.0.eb
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- pydot-3.0.3-GCCcore-13.3.0.eb
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- pyzstd-0.16.2-GCCcore-13.3.0.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/23923
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from-commit: 0eef0cf4f6e03172451c41a5af1c0e26b7a777f8
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- GDB-16.3-GCCcore-13.3.0.eb

‎easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.2.0-2025a.yml‎

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easyconfigs:
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- buildenv-default-foss-2025a.eb
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- GDB-16.3-GCCcore-14.2.0.eb
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- VTK-9.5.0-foss-2025a.eb
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- NLopt-2.10.0-GCCcore-14.2.0.eb

‎easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.2.0-2025b.yml‎

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# see https://github.com/easybuilders/easybuild-easyblocks/pull/4031
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include-easyblocks-from-commit: 64173059ec68ff74f68e08115ededa308b2af19a
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- foss-2025b.eb
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- LLVM-20.1.8-GCCcore-14.3.0.eb
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- lfoss-2025b.eb
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- libdrm-2.4.125-GCCcore-14.3.0.eb
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- minimap2-2.30-GCCcore-14.3.0.eb
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- BWA-0.7.19-GCCcore-14.3.0.eb
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- buildenv-default-foss-2025b.eb
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- Armadillo-15.0.1-foss-2025b.eb
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- GDB-16.3-GCCcore-14.3.0.eb
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- Rust-1.91.1-GCCcore-14.3.0.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25217
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from-commit: 9793e8871ab0c9e635e7b7fc4d06720c62aebb26
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- Python-bundle-PyPI-2025.07-GCCcore-14.3.0.eb
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- Pango-1.57.0-GCCcore-14.3.0.eb
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- Vala-0.56.18-GCCcore-14.3.0.eb
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- Wayland-1.24.0-GCCcore-14.3.0.eb
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- OpenGL-2025.09-GCCcore-14.3.0.eb
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- GTK3-3.24.43-GCCcore-14.3.0.eb

‎easystacks/software.eessi.io/2025.06/rebuilds/20260113-eb-5.2.0-poetry-new-dep.yml‎

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# In EasyBuild 5.2.0 poetry had a required package moved to an
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# external dependency
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# https://github.com/easybuilders/easybuild-easyconfigs/pull/24566
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# Rebuild versions already shipped in EESSI
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easyconfigs:
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- build-1.2.2.post1-GCCcore-13.3.0.eb # missing dep
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- poetry-1.8.3-GCCcore-13.3.0.eb
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- build-1.3.0-GCCcore-14.2.0.eb # missing dep
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- poetry-2.1.2-GCCcore-14.2.0.eb

‎easystacks/software.eessi.io/2025.06/rebuilds/20260115-eb-5.2.0-hwloc-2025a-2025b.yml‎

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# rebuild hwloc for 2025a and 2025b to pick up patch
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# that significantly improvies MPI startup time;
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# see also https://github.com/open-mpi/hwloc/issues/756
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easyconfigs:
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- hwloc-2.11.2-GCCcore-14.2.0.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25043
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from-commit: 9c1f56e168199e24831413a68d8e9e1660b46dab
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- hwloc-2.12.1-GCCcore-14.3.0.eb:
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options:
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# see https://github.com/easybuilders/easybuild-easyconfigs/pull/25063
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from-commit: a6ad24949b803bc028896a8136536085a5cd3c11

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