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{2023.06}[2023a,a64fx] add Siesta 5.2.2#1036

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ocaisa merged 6 commits intoEESSI:2023.06-software.eessi.iofrom
migueldiascosta:2023.06-a64fx-2023a-eb500-apps-siesta
May 12, 2025
Merged

{2023.06}[2023a,a64fx] add Siesta 5.2.2#1036
ocaisa merged 6 commits intoEESSI:2023.06-software.eessi.iofrom
migueldiascosta:2023.06-a64fx-2023a-eb500-apps-siesta

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@migueldiascosta migueldiascosta commented Apr 22, 2025

am I doing this right?

copied easystacks/software.eessi.io/2023.06/grace/eessi-2023.06-eb-5.0.0-2023a.yml to easystacks/software.eessi.io/2023.06/a64fx/eessi-2023.06-eb-5.0.0-2023a.yml

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eessi-bot Bot commented Apr 22, 2025

Instance eessi-bot-mc-aws is configured to build for:

  • architectures: x86_64/generic, x86_64/intel/haswell, x86_64/intel/sapphirerapids, x86_64/intel/skylake_avx512, x86_64/intel/cascadelake, x86_64/intel/icelake, x86_64/amd/zen2, x86_64/amd/zen3, aarch64/generic, aarch64/neoverse_n1, aarch64/neoverse_v1
  • repositories: eessi.io-2023.06-compat, eessi.io-2023.06-software

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gpu-bot-ugent Bot commented Apr 22, 2025

Instance eessi-bot-vsc-ugent is configured to build for:

  • architectures: x86_64/amd/zen3
  • repositories: eessi-hpc.org-2023.06-software, eessi.io-2023.06-compat, eessi-hpc.org-2023.06-compat, eessi.io-2023.06-software

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eessi-bot-deucalion Bot commented Apr 22, 2025

Instance eessi-bot-deucalion is configured to build for:

  • architectures: aarch64/a64fx
  • repositories: eessi.io-2023.06-software

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eessi-bot Bot commented Apr 22, 2025

Instance eessi-bot-mc-azure is configured to build for:

  • architectures: x86_64/amd/zen4
  • repositories: eessi.io-2023.06-compat, eessi.io-2023.06-software

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eessi-bot-surf Bot commented Apr 22, 2025

Instance eessi-bot-surf is configured to build for:

  • architectures: x86_64/amd/zen4, x86_64/amd/zen2
  • repositories: eessi-hpc.org-2023.06-software, eessi.io-2023.06-software, eessi.io-2023.06-compat, eessi-hpc.org-2023.06-compat

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eessi-bot-toprichard Bot commented Apr 22, 2025

Instance rt-Grace-jr is configured to build for:

  • architectures: aarch64/nvidia/grace
  • repositories: eessi.io-2023.06-software

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trz42 commented Apr 22, 2025

am I doing this right?

copied easystacks/software.eessi.io/2023.06/grace/eessi-2023.06-eb-5.0.0-2023a.yml to easystacks/software.eessi.io/2023.06/a64fx/eessi-2023.06-eb-5.0.0-2023a.yml

Looks good.

Just note that it failed in #1032 - see #1032 (comment)

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trz42 commented Apr 22, 2025

Let's give it a try...
bot: build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx

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eessi-bot Bot commented Apr 22, 2025 •
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Updates by the bot instance eessi-bot-mc-aws (click for details)

  • received bot command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx from trz42

    • expanded format: build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx

  • handling command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:

    • no jobs were submitted

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eessi-bot Bot commented Apr 22, 2025 •
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Updates by the bot instance eessi-bot-mc-azure (click for details)

  • received bot command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx from trz42

    • expanded format: build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx

  • handling command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:

    • no jobs were submitted

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eessi-bot-toprichard Bot commented Apr 22, 2025

Updates by the bot instance rt-Grace-jr (click for details)
  • account trz42 has NO permission to send commands to the bot

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gpu-bot-ugent Bot commented Apr 22, 2025 •
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Updates by the bot instance eessi-bot-vsc-ugent (click for details)

  • received bot command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx from trz42

    • expanded format: build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx

  • handling command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:

    • no jobs were submitted

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eessi-bot-deucalion Bot commented Apr 22, 2025 •
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Updates by the bot instance eessi-bot-deucalion (click for details)

  • received bot command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx from trz42

    • expanded format: build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx

  • handling command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:

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eessi-bot-surf Bot commented Apr 22, 2025 •
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Updates by the bot instance eessi-bot-surf (click for details)

  • received bot command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx from trz42

    • expanded format: build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx

  • handling command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:

    • no jobs were submitted

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eessi-bot-deucalion Bot commented Apr 22, 2025 •
edited by trz42
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New job on instance eessi-bot-deucalion for CPU micro-architecture aarch64-a64fx for repository eessi.io-2023.06-software in job dir /home/eessibot/new-bot/jobs/2025.04/pr_1036/409046

  • building the last package (Siesta itself) failed with

    ERROR: Shell command failed!
  full command              ->  make  -j 16  && SIESTA_TESTS_VERIFY=1 ctest --output-on-failure -E 'SpinPolarization-fe_spin_mpi4_omp|SpinPolarization-fe_spin_directphi_mpi4_omp1|SpinPolarization-fe_noncol_gga_mpi4_omp1|SpinPolarization-fe_noncol_kp_mpi4_omp1|SpinPolarization-fe_noncol_sp_mpi4_omp1|SpinOrbit-FePt-X-X_mpi4_omp1|SCFMixing-chargemix_mpi4_omp1|SCFMixing-pulay_mpi4_omp1'
  exit code                 ->  8
  called from               ->  'build_step' function in /cvmfs/software.eessi.io/versions/2023.06/software/linux/aarch64/a64fx/software/EasyBuild/5.0.0/lib/python3.11/site-packages/easybuild/easyblocks/generic/configuremake.py (line 382)
  working directory         -> /tmp/eessibot/easybuild/build/Siesta/5.2.2/foss-2023a/easybuild_obj
  output (stdout + stderr)  -> /tmp/eb-0b6sybho/eb-7lyahqg1/run-shell-cmd-output/make-5hlqlfkh/out.txt
  interactive shell script  -> /tmp/eb-0b6sybho/eb-7lyahqg1/run-shell-cmd-output/make-5hlqlfkh/cmd.sh

  • 134 (67+67: one "actual test" + one "verify" test) out of 264 tests failed. the "actual" tests all failed with Segmentation fault, for example, test 6

            Start   6: siesta-00.BasisSets-default_basis_mpi4_omp1
  6/264 Test   #6: siesta-00.BasisSets-default_basis_mpi4_omp1 .................................***Failed    3.47 sec
[cna0002:212438:0:212438] Caught signal 11 (Segmentation fault: address not mapped to object at address 0xffffff7fc330)
==== backtrace (tid: 212438) ====
 0  /cvmfs/software.eessi.io/versions/2023.06/software/linux/aarch64/a64fx/software/UCX/1.14.1-GCCcore-12.3.0/lib64/libucs.so.0(ucs_handle_error+0x294) [0xffffab1081f4]
 1  /cvmfs/software.eessi.io/versions/2023.06/software/linux/aarch64/a64fx/software/UCX/1.14.1-GCCcore-12.3.0/lib64/libucs.so.0(+0x28358) [0xffffab108358]
 2  /cvmfs/software.eessi.io/versions/2023.06/software/linux/aarch64/a64fx/software/UCX/1.14.1-GCCcore-12.3.0/lib64/libucs.so.0(+0x284f8) [0xffffab1084f8]
 3  linux-vdso.so.1(__kernel_rt_sigreturn+0) [0xffffbe7b07a0]
 4  /tmp/eessibot/easybuild/build/Siesta/5.2.2/foss-2023a/easybuild_obj/Src/siesta() [0x6feb48]
 5  /tmp/eessibot/easybuild/build/Siesta/5.2.2/foss-2023a/easybuild_obj/Src/siesta() [0x70963c]
 6  /tmp/eessibot/easybuild/build/Siesta/5.2.2/foss-2023a/easybuild_obj/Src/siesta() [0x718708]
 7  /tmp/eessibot/easybuild/build/Siesta/5.2.2/foss-2023a/easybuild_obj/Src/siesta() [0x71b4d4]
 8  /tmp/eessibot/easybuild/build/Siesta/5.2.2/foss-2023a/easybuild_obj/Src/siesta() [0x5367ac]
 9  /tmp/eessibot/easybuild/build/Siesta/5.2.2/foss-2023a/easybuild_obj/Src/siesta() [0x4202b8]
10  /tmp/eessibot/easybuild/build/Siesta/5.2.2/foss-2023a/easybuild_obj/Src/siesta() [0x414408]
11  /cvmfs/software.eessi.io/versions/2023.06/compat/linux/aarch64/lib/../lib64/libc.so.6(+0x26a7c) [0xffffb6c86a7c]
12  /cvmfs/software.eessi.io/versions/2023.06/compat/linux/aarch64/lib/../lib64/libc.so.6(__libc_start_main+0x98) [0xffffb6c86b4c]
13  /tmp/eessibot/easybuild/build/Siesta/5.2.2/foss-2023a/easybuild_obj/Src/siesta() [0x414a70]
=================================
--------------------------------------------------------------------------
Primary job  terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpiexec noticed that process rank 0 with PID 0 on node cna0002 exited on signal 11 (Segmentation fault).
--------------------------------------------------------------------------
    complete list of failed tests 
      6/264 Test   #6: siesta-00.BasisSets-default_basis_mpi4_omp1
  7/264 Test   #7: siesta-00.BasisSets-default_basis_mpi4_omp1[verify]
  8/264 Test   #8: siesta-00.BasisSets-fireballs_mpi4_omp1
  9/264 Test   #9: siesta-00.BasisSets-fireballs_mpi4_omp1[verify]
 10/264 Test  #10: siesta-00.BasisSets-nodes_mpi4_omp1
 11/264 Test  #11: siesta-00.BasisSets-nodes_mpi4_omp1[verify]
 12/264 Test  #12: siesta-00.BasisSets-bessel_mpi4_omp1
 13/264 Test  #13: siesta-00.BasisSets-bessel_mpi4_omp1[verify]
 14/264 Test  #14: siesta-00.BasisSets-bessel_rich_mpi4_omp1
 15/264 Test  #15: siesta-00.BasisSets-bessel_rich_mpi4_omp1[verify]
 16/264 Test  #16: siesta-00.BasisSets-custom_softbasis_mpi4_omp1
 17/264 Test  #17: siesta-00.BasisSets-custom_softbasis_mpi4_omp1[verify]
 20/264 Test  #20: siesta-00.BasisSets-ghost_atom_mpi4_omp1
 21/264 Test  #21: siesta-00.BasisSets-ghost_atom_mpi4_omp1[verify]
 22/264 Test  #22: siesta-01.PseudoPotentials-psf_mpi4_omp1
 23/264 Test  #23: siesta-01.PseudoPotentials-psf_mpi4_omp1[verify]
 24/264 Test  #24: siesta-01.PseudoPotentials-full.psml_mpi4_omp1
 25/264 Test  #25: siesta-01.PseudoPotentials-full.psml_mpi4_omp1[verify]
 26/264 Test  #26: siesta-01.PseudoPotentials-sl.psml_mpi4_omp1
 27/264 Test  #27: siesta-01.PseudoPotentials-sl.psml_mpi4_omp1[verify]
 28/264 Test  #28: siesta-01.PseudoPotentials-soft.psml_mpi4_omp1
 29/264 Test  #29: siesta-01.PseudoPotentials-soft.psml_mpi4_omp1[verify]
 30/264 Test  #30: siesta-01.PseudoPotentials-soft-full.psml_mpi4_omp1
 31/264 Test  #31: siesta-01.PseudoPotentials-soft-full.psml_mpi4_omp1[verify]
 32/264 Test  #32: siesta-01.PseudoPotentials-reparam_mpi4_omp1
 33/264 Test  #33: siesta-01.PseudoPotentials-reparam_mpi4_omp1[verify]
 34/264 Test  #34: siesta-01.PseudoPotentials-reparam-rgoff_mpi4_omp1
 35/264 Test  #35: siesta-01.PseudoPotentials-reparam-rgoff_mpi4_omp1[verify]
 36/264 Test  #36: siesta-02.SpinPolarization-fe_noncol_mpi4_omp1
 37/264 Test  #37: siesta-02.SpinPolarization-fe_noncol_mpi4_omp1[verify]
 38/264 Test  #38: siesta-03.SpinOrbit-FePt-offsite_mpi4_omp1
 39/264 Test  #39: siesta-03.SpinOrbit-FePt-offsite_mpi4_omp1[verify]
 40/264 Test  #40: siesta-03.SpinOrbit-FePt-onsite_mpi4_omp1
 41/264 Test  #41: siesta-03.SpinOrbit-FePt-onsite_mpi4_omp1[verify]
 48/264 Test  #48: siesta-05.Bands-ge_bands_mpi4_omp1
 49/264 Test  #49: siesta-05.Bands-ge_bands_mpi4_omp1[verify]
 50/264 Test  #50: siesta-05.Bands-ge_bands_so_mpi4_omp1
 51/264 Test  #51: siesta-05.Bands-ge_bands_so_mpi4_omp1[verify]
 52/264 Test  #52: siesta-05.Bands-ge_bands_so_bpoints_mpi4_omp1
 53/264 Test  #53: siesta-05.Bands-ge_bands_so_bpoints_mpi4_omp1[verify]
 54/264 Test  #54: siesta-05.Bands-ge_bands_so_fatbands_mpi4_omp1
 55/264 Test  #55: siesta-05.Bands-ge_bands_so_fatbands_mpi4_omp1[verify]
140/264 Test #140: siesta-10.Functionals-lyp_mpi4_omp1
141/264 Test #141: siesta-10.Functionals-lyp_mpi4_omp1[verify]
142/264 Test #142: siesta-10.Functionals-pbe_mpi4_omp1
143/264 Test #143: siesta-10.Functionals-pbe_mpi4_omp1[verify]
144/264 Test #144: siesta-10.Functionals-pbesol_mpi4_omp1
145/264 Test #145: siesta-10.Functionals-pbesol_mpi4_omp1[verify]
146/264 Test #146: siesta-10.Functionals-am05_mpi4_omp1
147/264 Test #147: siesta-10.Functionals-am05_mpi4_omp1[verify]
148/264 Test #148: siesta-10.Functionals-vdw_vv_mpi4_omp1
149/264 Test #149: siesta-10.Functionals-vdw_vv_mpi4_omp1[verify]
150/264 Test #150: siesta-10.Functionals-vdw_drsll_mpi4_omp1
151/264 Test #151: siesta-10.Functionals-vdw_drsll_mpi4_omp1[verify]
152/264 Test #152: siesta-10.Functionals-c6_mpi4_omp1
153/264 Test #153: siesta-10.Functionals-c6_mpi4_omp1[verify]
158/264 Test #158: siesta-11.ElectronicProperties-charge_mpi4_omp1
159/264 Test #159: siesta-11.ElectronicProperties-charge_mpi4_omp1[verify]
160/264 Test #160: siesta-11.ElectronicProperties-coop_mpi4_omp1
161/264 Test #161: siesta-11.ElectronicProperties-coop_mpi4_omp1[verify]
162/264 Test #162: siesta-11.ElectronicProperties-optical_mpi4_omp1
163/264 Test #163: siesta-11.ElectronicProperties-optical_mpi4_omp1[verify]
164/264 Test #164: siesta-11.ElectronicProperties-charge_sp_mpi4_omp1
165/264 Test #165: siesta-11.ElectronicProperties-charge_sp_mpi4_omp1[verify]
166/264 Test #166: siesta-11.ElectronicProperties-coop_sp_mpi4_omp1
167/264 Test #167: siesta-11.ElectronicProperties-coop_sp_mpi4_omp1[verify]
168/264 Test #168: siesta-11.ElectronicProperties-optical_sp_mpi4_omp1
169/264 Test #169: siesta-11.ElectronicProperties-optical_sp_mpi4_omp1[verify]
170/264 Test #170: siesta-11.ElectronicProperties-charge_partial-mulliken_mpi4_omp1
171/264 Test #171: siesta-11.ElectronicProperties-charge_partial-mulliken_mpi4_omp1[verify]
172/264 Test #172: siesta-11.ElectronicProperties-charge_partial-voronoi_mpi4_omp1
173/264 Test #173: siesta-11.ElectronicProperties-charge_partial-voronoi_mpi4_omp1[verify]
174/264 Test #174: siesta-11.ElectronicProperties-charge_partial-hirshfeld_mpi4_omp1
175/264 Test #175: siesta-11.ElectronicProperties-charge_partial-hirshfeld_mpi4_omp1[verify]
176/264 Test #176: siesta-12.Solvers-si_default_mpi4_omp1
177/264 Test #177: siesta-12.Solvers-si_default_mpi4_omp1[verify]
178/264 Test #178: siesta-12.Solvers-si_procy_mpi4_omp1
179/264 Test #179: siesta-12.Solvers-si_procy_mpi4_omp1[verify]
180/264 Test #180: siesta-12.Solvers-si_mrrr_mpi4_omp1
181/264 Test #181: siesta-12.Solvers-si_mrrr_mpi4_omp1[verify]
182/264 Test #182: siesta-12.Solvers-si_omm1_mpi4_omp1
183/264 Test #183: siesta-12.Solvers-si_omm1_mpi4_omp1[verify]
184/264 Test #184: siesta-12.Solvers-si_omm2_mpi4_omp1
185/264 Test #185: siesta-12.Solvers-si_omm2_mpi4_omp1[verify]
186/264 Test #186: siesta-12.Solvers-si_on_mpi4_omp1
187/264 Test #187: siesta-12.Solvers-si_on_mpi4_omp1[verify]
192/264 Test #192: siesta-12.Solvers-sih-elsi_mpi4_omp1
193/264 Test #193: siesta-12.Solvers-sih-elsi_mpi4_omp1[verify]
200/264 Test #200: siesta-13.MiscOptions-dip_corr_mpi4_omp1
201/264 Test #201: siesta-13.MiscOptions-dip_corr_mpi4_omp1[verify]
202/264 Test #202: siesta-13.MiscOptions-dip_corr_vac_mpi4_omp1
203/264 Test #203: siesta-13.MiscOptions-dip_corr_vac_mpi4_omp1[verify]
204/264 Test #204: siesta-13.MiscOptions-gate_charge_mpi4_omp1
205/264 Test #205: siesta-13.MiscOptions-gate_charge_mpi4_omp1[verify]
206/264 Test #206: siesta-13.MiscOptions-gate_hartree_mpi4_omp1
207/264 Test #207: siesta-13.MiscOptions-gate_hartree_mpi4_omp1[verify]
208/264 Test #208: siesta-13.MiscOptions-net_charge_mpi4_omp1
209/264 Test #209: siesta-13.MiscOptions-net_charge_mpi4_omp1[verify]
210/264 Test #210: siesta-13.MiscOptions-net_charge_dope_mpi4_omp1
211/264 Test #211: siesta-13.MiscOptions-net_charge_dope_mpi4_omp1[verify]
212/264 Test #212: siesta-13.MiscOptions-gcs_mpi4_omp1
213/264 Test #213: siesta-13.MiscOptions-gcs_mpi4_omp1[verify]
214/264 Test #214: siesta-13.MiscOptions-highmesh_mpi4_omp1
215/264 Test #215: siesta-13.MiscOptions-highmesh_mpi4_omp1[verify]
216/264 Test #216: siesta-13.MiscOptions-filter_cutoff_mpi4_omp1
217/264 Test #217: siesta-13.MiscOptions-filter_cutoff_mpi4_omp1[verify]
218/264 Test #218: siesta-13.MiscOptions-filter_tol_mpi4_omp1
219/264 Test #219: siesta-13.MiscOptions-filter_tol_mpi4_omp1[verify]
220/264 Test #220: siesta-13.MiscOptions-shift_cop_mpi4_omp1
221/264 Test #221: siesta-13.MiscOptions-shift_cop_mpi4_omp1[verify]
222/264 Test #222: siesta-13.MiscOptions-bulk_bias_mpi4_omp1
223/264 Test #223: siesta-13.MiscOptions-bulk_bias_mpi4_omp1[verify]
224/264 Test #224: siesta-13.MiscOptions-synth_atom_mpi4_omp1
225/264 Test #225: siesta-13.MiscOptions-synth_atom_mpi4_omp1[verify]
226/264 Test #226: siesta-14.FileIO-save_outs_mpi4_omp1
227/264 Test #227: siesta-14.FileIO-save_outs_mpi4_omp1[verify]
228/264 Test #228: siesta-14.FileIO-save_init_rho_mpi4_omp1
229/264 Test #229: siesta-14.FileIO-save_init_rho_mpi4_omp1[verify]
230/264 Test #230: siesta-14.FileIO-s_only_mpi4_omp1
231/264 Test #231: siesta-14.FileIO-s_only_mpi4_omp1[verify]
232/264 Test #232: siesta-14.FileIO-write_ncdf_mpi4_omp1
233/264 Test #233: siesta-14.FileIO-write_ncdf_mpi4_omp1[verify]
234/264 Test #234: siesta-14.FileIO-denchar_mpi4_omp1
235/264 Test #235: siesta-14.FileIO-denchar_mpi4_omp1[verify]
236/264 Test #236: siesta-14.FileIO-kp_file_mpi4_omp1
237/264 Test #237: siesta-14.FileIO-kp_file_mpi4_omp1[verify]
238/264 Test #238: siesta-14.FileIO-save_dm_mpi4_omp1
239/264 Test #239: siesta-14.FileIO-save_dm_mpi4_omp1[verify]
240/264 Test #240: siesta-15.TDDFT-TDDFT_h2o1_mpi4_omp1
241/264 Test #241: siesta-15.TDDFT-TDDFT_h2o1_mpi4_omp1[verify]
242/264 Test #242: siesta-15.TDDFT-TDDFT_h2o2_mpi4_omp1
243/264 Test #243: siesta-15.TDDFT-TDDFT_h2o2_mpi4_omp1[verify]
262/264 Test #262: siesta-Dependency_Tests-lua_h2o_mpi4_omp1
263/264 Test #263: siesta-Dependency_Tests-lua_h2o_mpi4_omp1[verify]
date job status comment
Apr 22 14:17:20 UTC 2025 submitted job id 409046 awaits release by job manager
Apr 22 14:18:19 UTC 2025 released job awaits launch by Slurm scheduler
Apr 22 14:19:22 UTC 2025 running job 409046 is running
Apr 22 22:16:56 UTC 2025 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-409046.out
✅ no message matching FATAL:
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
❌ no message matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-a64fx-1745359792.tar.gzsize: 144 MiB (151170559 bytes)
entries: 977
modules under 2023.06/software/linux/aarch64/a64fx/modules/all
PnetCDF/1.12.3-gompi-2023a.lua
Simple-DFTD3/1.2.1-gfbf-2023a.lua
TOML-Fortran/0.4.2-GCC-12.3.0.lua
flook/0.8.4-GCC-12.3.0.lua
json-fortran/9.0.2-GCC-12.3.0.lua
libGridXC/2.0.2-gompi-2023a.lua
libPSML/2.1.0-GCC-12.3.0.lua
libfdf/0.5.1-GCC-12.3.0.lua
libxc/6.2.2-GCC-12.3.0.lua
mctc-lib/0.3.1-GCC-12.3.0.lua
mstore/0.3.0-GCC-12.3.0.lua
netCDF-Fortran/4.6.1-gompi-2023a.lua
ruamel.yaml/0.17.32-GCCcore-12.3.0.lua
test-drive/0.5.0-GCC-12.3.0.lua
xmlf90/1.6.3-GCC-12.3.0.lua
software under 2023.06/software/linux/aarch64/a64fx/software
PnetCDF/1.12.3-gompi-2023a
Simple-DFTD3/1.2.1-gfbf-2023a
TOML-Fortran/0.4.2-GCC-12.3.0
flook/0.8.4-GCC-12.3.0
json-fortran/9.0.2-GCC-12.3.0
libGridXC/2.0.2-gompi-2023a
libPSML/2.1.0-GCC-12.3.0
libfdf/0.5.1-GCC-12.3.0
libxc/6.2.2-GCC-12.3.0
mctc-lib/0.3.1-GCC-12.3.0
mstore/0.3.0-GCC-12.3.0
netCDF-Fortran/4.6.1-gompi-2023a
ruamel.yaml/0.17.32-GCCcore-12.3.0
test-drive/0.5.0-GCC-12.3.0
xmlf90/1.6.3-GCC-12.3.0
other under 2023.06/software/linux/aarch64/a64fx
no other files in tarball
Apr 22 22:16:56 UTC 2025 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ SKIP ] (1/5) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ SKIP ] (2/5) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ OK ] (3/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:aarch64_a64fx+default
P: latency: 1.72 us (r:0, l:None, u:None)
[ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:aarch64_a64fx+default
P: bandwidth: 8100.87 MB/s (r:0, l:None, u:None)
[ OK ] (5/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:aarch64_a64fx+default
P: perf: 579.207 timesteps/s (r:0, l:None, u:None)
[ PASSED ] Ran 3/5 test case(s) from 5 check(s) (0 failure(s), 2 skipped, 0 aborted)
Details
✅ job output file slurm-409046.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@trz42 trz42 added 2023.06-software.eessi.io 2023.06 version of software.eessi.io a64fx labels Apr 22, 2025
@migueldiascosta migueldiascosta mentioned this pull request Apr 24, 2025
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migueldiascosta commented Apr 24, 2025

I guess

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won't work for me, or will it...

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bot: build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx

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bot: build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx

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New job on instance eessi-bot-deucalion for CPU micro-architecture aarch64-a64fx for repository eessi.io-2023.06-software in job dir /home/eessibot/new-bot/jobs/2025.05/pr_1036/418415

date job status comment
May 09 13:38:58 UTC 2025 submitted job id 418415 awaits release by job manager
May 09 13:43:52 UTC 2025 released job awaits launch by Slurm scheduler
May 09 13:44:56 UTC 2025 running job 418415 is running
May 12 08:26:40 UTC 2025 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-418415.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-a64fx-17468037310.tar.gzsize: 58 MiB (61740836 bytes)
entries: 1176
modules under 2023.06/software/linux/aarch64/a64fx/modules/all
PnetCDF/1.12.3-gompi-2023a.lua
Siesta/5.2.2-foss-2023a.lua
Simple-DFTD3/1.2.1-gfbf-2023a.lua
TOML-Fortran/0.4.2-GCC-12.3.0.lua
flook/0.8.4-GCC-12.3.0.lua
json-fortran/9.0.2-GCC-12.3.0.lua
libGridXC/2.0.2-gompi-2023a.lua
libPSML/2.1.0-GCC-12.3.0.lua
libfdf/0.5.1-GCC-12.3.0.lua
mctc-lib/0.3.1-GCC-12.3.0.lua
mstore/0.3.0-GCC-12.3.0.lua
ruamel.yaml/0.17.32-GCCcore-12.3.0.lua
test-drive/0.5.0-GCC-12.3.0.lua
xmlf90/1.6.3-GCC-12.3.0.lua
software under 2023.06/software/linux/aarch64/a64fx/software
PnetCDF/1.12.3-gompi-2023a
Siesta/5.2.2-foss-2023a
Simple-DFTD3/1.2.1-gfbf-2023a
TOML-Fortran/0.4.2-GCC-12.3.0
flook/0.8.4-GCC-12.3.0
json-fortran/9.0.2-GCC-12.3.0
libGridXC/2.0.2-gompi-2023a
libPSML/2.1.0-GCC-12.3.0
libfdf/0.5.1-GCC-12.3.0
mctc-lib/0.3.1-GCC-12.3.0
mstore/0.3.0-GCC-12.3.0
ruamel.yaml/0.17.32-GCCcore-12.3.0
test-drive/0.5.0-GCC-12.3.0
xmlf90/1.6.3-GCC-12.3.0
other under 2023.06/software/linux/aarch64/a64fx
no other files in tarball
May 12 08:26:40 UTC 2025 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ SKIP ] (1/9) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ SKIP ] (2/9) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ SKIP ] (3/9) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ SKIP ] (4/9) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ OK ] (5/9) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:aarch64_a64fx+default
P: perf: 577.956 timesteps/s (r:0, l:None, u:None)
[ OK ] (6/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:aarch64_a64fx+default
P: latency: 1.67 us (r:0, l:None, u:None)
[ OK ] (7/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:aarch64_a64fx+default
P: latency: 1.74 us (r:0, l:None, u:None)
[ OK ] (8/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:aarch64_a64fx+default
P: bandwidth: 8777.37 MB/s (r:0, l:None, u:None)
[ OK ] (9/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:aarch64_a64fx+default
P: bandwidth: 8701.38 MB/s (r:0, l:None, u:None)
[ PASSED ] Ran 5/9 test case(s) from 9 check(s) (0 failure(s), 4 skipped, 0 aborted)
Details
✅ job output file slurm-418415.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 12 08:34:33 UTC 2025 uploaded transfer of eessi-2023.06-software-linux-aarch64-a64fx-17468037310.tar.gz to S3 bucket succeeded

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Comment thread easystacks/software.eessi.io/2023.06/a64fx/eessi-2023.06-eb-5.0.0-2023a.yml
# Siesta testsuite fails in Deucalion's a64fx EESSI build environment
# but skipping the tests during build and then running them with the
# installed module works, so skipping the tests only in this case
skip-test-step: True
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We discussed this in a support meeting and said that given the tests do succeed when built outside of the EESSI container setup that it may well be due to FS delays in the overlays so we will move ahead with merging this.

@ocaisa ocaisa added the bot:deploy Ask bot to deploy missing software installations to EESSI label May 12, 2025
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ocaisa commented May 12, 2025

Staging PR merged and ingested

@ocaisa ocaisa merged commit d1d0106 into EESSI:2023.06-software.eessi.io May 12, 2025
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eessi-bot Bot commented May 12, 2025

PR merged! Moved [] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2025.05.12

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eessi-bot-deucalion Bot commented May 12, 2025

PR merged! Moved ['/home/eessibot/new-bot/jobs/2025.05/pr_1036/418415', '/home/eessibot/new-bot/jobs/2025.04/pr_1036/409046', '/home/eessibot/new-bot/jobs/2025.04/pr_1036/410545', '/home/eessibot/new-bot/jobs/2025.04/pr_1036/410814'] to /home/eessibot/new-bot/trash-bin/EESSI/software-layer/2025.05.12

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  • received bot command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx from ocaisa

    • expanded format: build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx

  • handling command build instance:eessi-bot-deucalion repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:

    • no jobs were submitted

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eessi-bot Bot commented May 12, 2025

PR merged! Moved [] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2025.05.12

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2023.06-software.eessi.io 2023.06 version of software.eessi.io a64fx bot:deploy Ask bot to deploy missing software installations to EESSI

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@migueldiascosta @trz42 @ocaisa