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Reinstate tests with pushed docker image
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.github/workflows/workflow_tests.yml

Lines changed: 9 additions & 9 deletions
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@@ -32,17 +32,17 @@ jobs:
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run: |
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make get-test-data
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#- name: Run Lipidomics WDL with lipidomics test data and pushed Docker Image
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# run: |
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# miniwdl run wdl/metaMS_lcmslipidomics.wdl -i wdl/metams_input_lipidomics.json --verbose --no-cache --copy-input-files
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- name: Run Lipidomics WDL with lipidomics test data and pushed Docker Image
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run: |
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miniwdl run wdl/metaMS_lcmslipidomics.wdl -i wdl/metams_input_lipidomics.json --verbose --no-cache --copy-input-files
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#- name: Run LCMS metabolomics WDL with test data and pushed Docker Image
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# run: |
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# make wdl-run-lcms-metab
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- name: Run LCMS metabolomics WDL with test data and pushed Docker Image
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run: |
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make wdl-run-lcms-metab
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#- name: Run GCMS WDL with pushed Docker Image
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# run: |
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# miniwdl run wdl/metaMS_gcms.wdl -i wdl/metams_input_gcms.json --verbose --no-cache --copy-input-files
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- name: Run GCMS WDL with pushed Docker Image
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run: |
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miniwdl run wdl/metaMS_gcms.wdl -i wdl/metams_input_gcms.json --verbose --no-cache --copy-input-files
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- name: Build Docker Image
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run: |

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