chore/use src layout (#13)

* use src layout

* update coverage section of pyproject.toml

* Fix test paths in CI workflow for consistency

---------

Co-authored-by: Emmanuel Mathot <emmanuel.mathot@gmail.com>

Author: d-v-b

.github/workflows/ci.yml

@@ -50,7 +50,7 @@ jobs:
 
     - name: Run tests
       run: |
-        uv run pytest eopf_geozarr/tests/ -v --tb=short -m "not network" --cov=eopf_geozarr --cov-report=xml --cov-report=term-missing
+        uv run pytest tests/ -v --tb=short -m "not network" --cov=eopf_geozarr --cov-report=xml --cov-report=term-missing
 
     - name: Upload coverage to Codecov
       if: matrix.os == 'ubuntu-latest' && matrix.python-version == '3.11'
@@ -105,7 +105,7 @@ jobs:
 
     - name: Run network tests
       run: |
-        uv run pytest eopf_geozarr/tests/ -v --tb=short -m "network"
+        uv run pytest tests/ -v --tb=short -m "network"
 
   security:
     runs-on: ubuntu-latest

pyproject.toml

@@ -77,7 +77,7 @@ Documentation = "https://github.com/developmentseed/eopf-geozarr/tree/main/docs"
 eopf-geozarr = "eopf_geozarr.cli:main"
 
 [tool.setuptools.packages.find]
-where = ["."]
+where = ["src"]
 include = ["eopf_geozarr*"]
 
 [tool.setuptools.package-data]
@@ -140,8 +140,11 @@ markers = [
 ]
 
 [tool.coverage.run]
-source = ["."]
-omit = ["*/tests/*", "*/test_*", "setup.py"]
+source = ["src"]
+omit = [
+    "tests/*",
+    "setup.py",
+]
 
 [tool.coverage.report]
 exclude_lines = [