SIMA patch for energy bug in physics-dynamics coupling

[jimmielin]

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Originator(s): @jimmielin (adapted from original fixes by @PeterHjortLauritzen)
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Description (include the issue title, and the keyword ['closes', 'fixes', 'resolves'] followed by the issue number):

• Companion issue of SIMA patch for fixing energy bug in physics-dynamics coupling atmospheric_physics#393
• CAM-SIMA equivalent fix of cam6_4_173: fix energy bug in physics-dynamics coupling CAM#1554

Describe any changes made to build system:

Describe any changes made to the namelist:

List any changes to the defaults for the input datasets (e.g. boundary datasets):

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List all files added and what they do:

List all existing files that have been modified, and describe the changes:
(Helpful git command: git diff --name-status development...<your_branch_name>)

M       src/data/registry.xml
M       tools/stdnames_to_inputnames_dictionary.xml
  - update long name of cp_or_cv_dycore to clarify its runtime usage
  - add cp_or_cv_dycore_at_start_of_physics_timestep which is used by the dycore energy consistency adjust scheme and energy checker

M       src/dynamics/mpas/dyn_coupling_impl.F90
M       src/dynamics/se/dp_coupling.F90
  - save cp_or_cv_dycore_at_start_of_physics_timestep during d-p coupling

If there are new failures (compared to the test/existing-test-failures.txt file),
have them OK'd by the gatekeeper, note them here, and add them to the file.
If there are baseline differences, include the test and the reason for the
diff. What is the nature of the change? Roundoff?

derecho/intel/aux_sima:

derecho/gnu/aux_sima:

derecho/nvhpc/aux_sima (test is run via Github workflow. Only run the test manually if we need to save new baselines):

If this changes climate describe any run(s) done to evaluate the new
climate in enough detail that it(they) could be reproduced:

CAM-SIMA date used for the baseline comparison tests if different than latest:

[nusbaume]

Thanks @jimmielin!

[nusbaume]

@kuanchihwang This PR adds a line to one of the MPAS routines, so I wanted to make you aware. Don't feel like you have to review this whole PR if you don't have the time. Thanks!

[kuanchihwang]

Thanks @jimmielin! I have a couple of (very simple) change requests.

[jimmielin]

Thanks @kuanchihwang! Committed your changes as suggested (GitHub auto-resolved the comments)

[kuanchihwang]

Thanks again @jimmielin!