SIMA patch for fixing energy bug in physics-dynamics coupling

[jimmielin]

Tag name (The PR title should also include the tag name):
Originator(s): @jimmielin (adapted from original fixes by @PeterHjortLauritzen)

Description (include issue title and the keyword ['closes', 'fixes', 'resolves'] and issue number):

• CAM-SIMA equivalent of cam6_4_173: fix energy bug in physics-dynamics coupling CAM#1554
• Add missing thermo_water_update call (although commented out as not used) in CAM4 SDF

List all namelist files that were added or changed:

List all files eliminated and why:

List all files added and what they do:

List all existing files that have been modified, and describe the changes:
(Helpful git command: git diff --name-status main...<your_branch_name>)

M       schemes/conservation_adjust/check_energy/check_energy_chng.meta
M       schemes/conservation_adjust/check_energy/check_energy_scaling.meta
M       schemes/conservation_adjust/check_energy/dycore_energy_consistency_adjust.meta
M       schemes/sima_diagnostics/check_energy_diagnostics.F90
M       schemes/sima_diagnostics/check_energy_diagnostics.meta
  - update cp_or_cv_dycore and scaling_dycore standard names to add _at_start_of_physics_timestep as correctly intended

M       suites/suite_cam7.xml
M       suites/suite_kessler.xml
M       suites/suite_tj2016.xml
  - comment out thermo_water_update as it is used for not-yet-present tot_energy_phys diag.
  - add comments explaining the true purpose of mid-physics thermo_water_update.

M       suites/suite_cam4.xml
  - add missing commented thermo_water_update call to be consistent with other SDFs

List all automated tests that failed, as well as an explanation for why they weren't fixed:

Is this an answer-changing PR? If so, is it a new physics package, algorithm change, tuning change, etc?

If yes to the above question, describe how this code was validated with the new/modified features:

[nusbaume]

Thanks @jimmielin!