Prevent ontology term links being recreated on every update. Fixes #1270#1271
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Pull request overview
This PR aims to prevent OntologyTermLink records from being destroyed/recreated on every update by reusing existing links where possible, addressing unusually large link IDs (Fixes #1270).
Changes:
- Adds a custom
*_links=setter inHasOntologyTermsto preserve existingOntologyTermLinks when the assigned term URIs haven’t changed. - Introduces a regression test ensuring ontology term link records are not recreated when reassigning the same scientific topics, and that only genuinely changed topics result in new link records.
Reviewed changes
Copilot reviewed 2 out of 2 changed files in this pull request and generated 3 comments.
| File | Description |
|---|---|
lib/has_ontology_terms.rb |
Overrides the association writer for ontology term link associations to keep matching existing links by term_uri instead of always replacing them with new records. |
test/models/event_test.rb |
Adds a test verifying ontology term links aren’t recreated on repeated updates, and only changed terms produce new links. |
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| assert_equal ontology_term_links, e.reload.ontology_term_links.to_a | ||
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This assertion compares arrays of ActiveRecord objects with an implicit ordering from the database. To avoid flaky tests across DB adapters or query plans, compare sorted IDs (or otherwise normalize ordering) rather than relying on to_a returning a stable order.
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Summary of changes
OntologyTermLinks and keeps those over creating new ones.Motivation and context
Noticed the IDs of OntologyTermLink records were gigantic.
Checklist