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Update examples
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‎examples/Basic.ipynb‎

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‎examples/KineticModelling.ipynb‎

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‎examples/outputs/enzmldoc.jsonld‎

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}
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},
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"@type": [
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"id": "v_max",
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"name": "v_max",
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"symbol": "v_max",
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"initial_value": 7.0,
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"upper_bound": 20.0,
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"lower_bound": 2.0,
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"id": "K_m",
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"name": "K_m",
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"symbol": "K_m",
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"constant": true
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{
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"@id": "enzml:Parameter/92e93bfa-0c00-4146-ac62-5c518f6dfdd5",
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"id": "K_m",
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"name": "K_m",
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"name": "v_max",
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"constant": true
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}
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],

‎examples/outputs/ethanol_degradation.omex‎

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‎examples/outputs/ethanol_degradation.xml‎

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<compartment id="v1" name="Eppendorf tube" spatialDimensions="3" size="10" units="u3" constant="true">
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<annotation>
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<rdf:RDF xmlns:OBO="http://purl.obolibrary.org/obo/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:schema="https://schema.org/">
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<schema:name>Eppendorf tube</schema:name>
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<OBO:OBI_0002139 rdf:datatype="http://www.w3.org/2001/XMLSchema#double">10.0</OBO:OBI_0002139>
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<rdf:type rdf:resource="http://www.enzymeml.org/v2/Vessel"/>
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</species>
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</listOfSpecies>
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<listOfParameters>
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<parameter id="v_max" name="v_max" value="7" constant="true">
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<parameter id="K_m" name="K_m" value="80" constant="true">
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<annotation>
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<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
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<rdf:type rdf:resource="http://www.enzymeml.org/v2/Parameter"/>
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</rdf:Description>
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</rdf:RDF>
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<parameter xmlns="https://www.enzymeml.org/v2">
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<lowerBound>2.0</lowerBound>
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<upperBound>20.0</upperBound>
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<lowerBound>20.0</lowerBound>
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<upperBound>200.0</upperBound>
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<stdDeviation/>
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</parameter>
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</annotation>
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</parameter>
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<parameter id="K_m" name="K_m" value="80" constant="true">
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<parameter id="v_max" name="v_max" value="7" constant="true">
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<annotation>
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<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
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<rdf:Description rdf:about="http://www.enzymeml.org/v2/Parameter/92e93bfa-0c00-4146-ac62-5c518f6dfdd5">
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<rdf:type rdf:resource="http://www.enzymeml.org/v2/Parameter"/>
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<parameter xmlns="https://www.enzymeml.org/v2">
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<lowerBound>2.0</lowerBound>
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<upperBound>20.0</upperBound>
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</parameter>
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</annotation>

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