Skip to content

Commit f6fe0d9

Browse files
committed
Removed chromosome chr-based filtering
1 parent dbef3f5 commit f6fe0d9

1 file changed

Lines changed: 0 additions & 2 deletions

File tree

selene_sdk/predict/model_predict.py

Lines changed: 0 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -310,8 +310,6 @@ def _get_sequences_from_bed_file(self,
310310
strand = '.'
311311
if isinstance(strand_index, int) and len(cols) > strand_index:
312312
strand = cols[strand_index]
313-
if 'chr' not in chrom:
314-
chrom = 'chr{0}'.format(chrom)
315313
if not str.isdigit(start) or not str.isdigit(end) \
316314
or chrom not in self.reference_sequence.genome:
317315
na_rows.append(line)

0 commit comments

Comments
 (0)