GaitiLabUtils/NAMESPACE at main · GaitiLab/GaitiLabUtils · GitHub

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# Generated by roxygen2: do not edit by hand

export(LMM_test)
export(add_frame)
export(add_scalebar)
export(build_clustree_plot)
export(compute_nrows_in_facetgrid)
export(compute_total_facetgrid_dimensions)
export(convert_h5ad_to_seurat)
export(convert_list_to_df)
export(create_dir)
export(create_hm)
export(cutoff_values)
export(default_theme)
export(elbow_method_wrapper)
export(extract_default_clustree_legend)
export(format_number_as_string)
export(format_p_value)
export(format_scientific)
export(generate_logfile_name)
export(generate_pairs)
export(geom_signif_lmm)
export(get_bracket_height)
export(get_bracket_height_rolling)
export(get_cell_function)
export(get_color_palette)
export(get_current_date)
export(get_name)
export(get_optimal_output_size)
export(get_pcs)
export(init_logging)
export(init_obj_logging)
export(is_valid_path)
export(jaccard_similarity)
export(log_debug)
export(log_error)
export(log_fatal)
export(log_info)
export(log_object)
export(log_warn)
export(merge_dfs)
export(min_max_scaling)
export(normalizedata_wrapper)
export(one_sample_perm_test_pval)
export(order_stacked_barplot)
export(overlap_coefficient)
export(params_ls_to_df)
export(pretty_breaks_unexpanded)
export(pretty_limits)
export(remove_axes)
export(save_hm)
export(set_logfile)
export(set_wd)
export(setup_default_argparser)
export(sorensen_dice_index)
export(transpose_df)
export(write_versions_yml)
importFrom(ComplexHeatmap,draw)
importFrom(argparse,ArgumentParser)
importFrom(dplyr,"%>%")
importFrom(glue,glue)
importFrom(lifecycle,deprecated)
importFrom(log4r,bare_log_layout)
importFrom(log4r,console_appender)
importFrom(log4r,default_log_layout)
importFrom(log4r,logger)