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Pull requests: GenomicsStandardsConsortium/mixs

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Pull requests list

build: generate OWL with OLS options + SPARQL post-processing
#1254 opened Jul 2, 2026 by turbomam Member • Draft
1
Cite the MIxS paper via a schema see_also (DOI)
#1250 opened Jul 2, 2026 by turbomam Member Loading…
3
Remove the stale source assertion from the ontology header
#1249 opened Jul 2, 2026 by turbomam Member Loading…
5
Bump the schema version during release so it stops drifting
#1248 opened Jul 2, 2026 by turbomam Member Loading…
4
Remove the internal slot-title note from the ontology header
#1247 opened Jul 2, 2026 by turbomam Member Loading…
3
Set the schema version string to 6.3.1 (was stale v6.2.0)
#1246 opened Jul 2, 2026 by turbomam Member Loading…
6
Describe MIxS (from GSC) in the ontology description, not the file
#1245 opened Jul 2, 2026 by turbomam Member Loading…
6
Document system prerequisites for building and testing (yq, Poetry, Python)
#1243 opened Jul 2, 2026 by turbomam Member Loading…
4
Build OWL against linkml owl-declare-grouping-classes branch (for OLS enum grouping)
#1238 opened Jul 1, 2026 by turbomam Member • Draft
10
Multivalued TSV round-trip demo and equivalence test
#1236 opened Jul 1, 2026 by turbomam Member • Draft
21
Consolidate schema-version diffing tools and publish version-change summaries on GH pages, including v5-to-v6.0.0
#1235 opened Jul 1, 2026 by turbomam Member Loading…
1
15
Add grouping referential-integrity tests and documentation
#1233 opened Jun 25, 2026 by turbomam Member • Draft
2
Show a slot's subsets and slot_group on its documentation page
#1232 opened Jun 25, 2026 by turbomam Member • Draft
2
Add MInAS ancient DNA terms and inital Mims extension combinations. MIxSv7.0
#1230 opened Jun 22, 2026 by jfy133 Collaborator Loading…
44
1
Turn on automated security checks and add a reporting policy
#1226 opened Jun 17, 2026 by turbomam Member Loading…
5
Deprecate x16s_recover and x16s_recover_software
#1189 opened Mar 30, 2026 by turbomam Member Loading…
1
10
Changes to to the Build Environment to accommodate ESA needs MIxSv7.0
#1180 opened Mar 16, 2026 by Woolly-at-EBI Collaborator Loading…
2
Update definition area samp size 1-TermUpdate Update suggestion for existing term, including bugs. Issues from "cig-bug" label moved here.
#1079 opened Dec 5, 2025 by Woolly-at-EBI Collaborator Loading…
7
Add internal document describing CIG/TWG process for adding a new term to MIxS
#1054 opened Sep 10, 2025 by jfy133 Collaborator Loading…
1
44
Update description of MIXS:0000127 in mixs.yaml
#987 opened Jun 18, 2025 by only1chunts Member Loading…
1
11
current land use enum with URL safe characters
#972 opened May 27, 2025 by turbomam Member Loading…
1
23
season_temp and season for Soil
#966 opened May 20, 2025 by turbomam Member Loading…
1
9
Documentation: MIxS Term (linkML slot) specification documentation
#944 opened Apr 28, 2025 by jfy133 Collaborator Loading…
182
Documentation: examples of 'gold standard' slots as a reference guide for newcomers
#943 opened Apr 28, 2025 by jfy133 Collaborator Loading…
46
Add descriptions for enumerations
#891 opened Jan 27, 2025 by sujaypatil96 Collaborator • Draft
1
4
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