NPI-4443 Pandas 3 compatibility fixes#109

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NPI-4443-pandas-3-compatibility

Commits on Jan 28, 2026

NPI-4443 use warnings.warn() rather than logger.warning(), in SP3 processing, to aid unit test design
treefern
committed
NPI-4443 fixed a header in SP3 test data to match number of epochs
treefern
committed
NPI-4443 revise sp3 tests to check warnings and not print them to the terminal. This clean up will support work to fix Pandas 3 compatibility issues. While these issues are worked through, the last…
treefern
committed
NPI-4443 update gn_diffaux.py to use warnings.warn(), check and do not print them in unittests
treefern
committed
NPI-4443 update filenames.py to use warnings.warn(), check and do not print them in unittests
treefern
committed
NPI-4443 update filenames.py sort discrepant filename vs content keys in warnings, to make unit tests deterministic
treefern
committed
NPI-4443 fix an example SP3 to have technically correct comment lines
treefern
committed
NPI-4443 update test_filenames.py to check and thereby avoid printing warning messages
treefern
committed
NPI-4443 update gn_download.py to use warnings.warn() for warnings
treefern
committed
NPI-4443 slight clean up of exception handling in gn_download.py, to remove a redundant error log
treefern
committed
NPI-4443 update some type hints
treefern
committed
NPI-4443 check and avoid printing warning in test_download.py
treefern
committed
NPI-4443 update various functions for Pandas 3 compatibility, mainly relating to restrictions on chained assignment and implicit modification
treefern
committed
NPI-4443 unpin pandas to allow python 3.10 and 3.11+ to use different versions
treefern
committed

Commits on Jan 29, 2026

NPI-4443 small changes to improve compliance with pandas3 CoW changes and related warnings, tested using pandas.options.mode.copy_on_write = "warn"
treefern
committed

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NPI-4443 Pandas 3 compatibility fixes#109

NPI-4443 Pandas 3 compatibility fixes#109
treefern wants to merge 15 commits into
mainfrom
NPI-4443-pandas-3-compatibility

Commits on Jan 28, 2026

NPI-4443 use warnings.warn() rather than logger.warning(), in SP3 processing, to aid unit test design

NPI-4443 fixed a header in SP3 test data to match number of epochs

NPI-4443 revise sp3 tests to check warnings and not print them to the terminal. This clean up will support work to fix Pandas 3 compatibility issues. While these issues are worked through, the last…

NPI-4443 update gn_diffaux.py to use warnings.warn(), check and do not print them in unittests

NPI-4443 update filenames.py to use warnings.warn(), check and do not print them in unittests

NPI-4443 update filenames.py sort discrepant filename vs content keys in warnings, to make unit tests deterministic

NPI-4443 fix an example SP3 to have technically correct comment lines

NPI-4443 update test_filenames.py to check and thereby avoid printing warning messages

NPI-4443 update gn_download.py to use warnings.warn() for warnings

NPI-4443 slight clean up of exception handling in gn_download.py, to remove a redundant error log

NPI-4443 update some type hints

NPI-4443 check and avoid printing warning in test_download.py

NPI-4443 update various functions for Pandas 3 compatibility, mainly relating to restrictions on chained assignment and implicit modification

NPI-4443 unpin pandas to allow python 3.10 and 3.11+ to use different versions

Commits on Jan 29, 2026

NPI-4443 small changes to improve compliance with pandas3 CoW changes and related warnings, tested using pandas.options.mode.copy_on_write = "warn"