Change scripts so that they work from the main directory of the repo.

Author: kevinbackhouse

src/run_audit.sh

@@ -9,8 +9,8 @@ if [ -z "$1" ]; then
   exit 1; 
 fi
 
-./run_seclab_agent.sh -t seclab_taskflows.taskflows.audit.fetch_source_code -g repo=$1
-./run_seclab_agent.sh -t seclab_taskflows.taskflows.audit.identify_applications -g repo=$1
-./run_seclab_agent.sh -t seclab_taskflows.taskflows.audit.gather_web_entry_point_info -g repo=$1
-./run_seclab_agent.sh -t seclab_taskflows.taskflows.audit.classify_application_local -g repo=$1
-./run_seclab_agent.sh -t seclab_taskflows.taskflows.audit.audit_issue_local_iter -g repo=$1
+python -m seclab_taskflow_agent -t seclab_taskflows.taskflows.audit.fetch_source_code -g repo=$1
+python -m seclab_taskflow_agent -t seclab_taskflows.taskflows.audit.identify_applications -g repo=$1
+python -m seclab_taskflow_agent -t seclab_taskflows.taskflows.audit.gather_web_entry_point_info -g repo=$1
+python -m seclab_taskflow_agent -t seclab_taskflows.taskflows.audit.classify_application_local -g repo=$1
+python -m seclab_taskflow_agent -t seclab_taskflows.taskflows.audit.audit_issue_local_iter -g repo=$1

src/run_seclab_agent.sh

@@ -6,8 +6,10 @@ if [ ! -f ".env" ]; then
 fi
 
 mkdir -p logs
-mkdir -p data
 
 docker run -i \
        --mount type=bind,src="$PWD",dst=/app \
-       -e GH_TOKEN="$GH_TOKEN" -e AI_API_TOKEN="$AI_API_TOKEN" "ghcr.io/githubsecuritylab/seclab-taskflow-agent" "$@"
+       --mount type=bind,src="./logs",dst=/root/.local \
+       -e GH_TOKEN="$GH_TOKEN" -e AI_API_TOKEN="$AI_API_TOKEN" --entrypoint /bin/bash \
+       "ghcr.io/githubsecuritylab/seclab-taskflow-agent" \
+       -c "pip install -q -e /app ; $*"