Merge pull request LREN-CHUV#39 from LREN-CHUV/fix-tests

fix failing tests for python-anova and python-summary-statistics

Author: ludovicc

python-anova/tests/docker-compose.yml

@@ -68,14 +68,18 @@ services:
     environment:
       NODE: job_test
       JOB_ID: 1
-      IN_JDBC_DRIVER: org.postgresql.Driver
-      IN_JDBC_URL: jdbc:postgresql://db:5432/features
-      IN_JDBC_USER: features
-      IN_JDBC_PASSWORD: featurespwd
-      OUT_JDBC_DRIVER: org.postgresql.Driver
-      OUT_JDBC_URL: jdbc:postgresql://db:5432/woken
-      OUT_JDBC_USER: woken
-      OUT_JDBC_PASSWORD: wokenpwd
+      IN_DBAPI_DRIVER: postgresql
+      IN_USER: features
+      IN_PASSWORD: featurespwd
+      IN_HOST: db
+      IN_PORT: 5432
+      IN_DATABASE: features
+      OUT_DBAPI_DRIVER: postgresql
+      OUT_USER: woken
+      OUT_PASSWORD: wokenpwd
+      OUT_HOST: db
+      OUT_PORT: 5432
+      OUT_DATABASE: woken
       PARAM_variables: "score_test1"
       PARAM_covariables: "stress_before_test1,iq"
       PARAM_grouping: ""

python-histograms/tests/unit_test.py

@@ -112,8 +112,8 @@ def test_intermediate_stats_empty(mock_save_error, mock_save_results, mock_fetch
     with mock.patch('sys.exit'):
         intermediate_stats()
 
-    error = mock_save_results.call_args[0][1]
-    assert error == 'Dependent variable has no values, check your SQL query.'
+    error = mock_save_error.call_args[0]
+    assert error == ('Dependent variable has no values, check your SQL query.',)
 
 
 def intermediate_data_1():