Generate age histograms

HealthNetworks · HealthNetworks · commit b086dd2d5a5c · 2026-04-15T14:35:51.000Z
diff --git a/analysis/dataset_definition.py b/analysis/dataset_definition.py
@@ -12,3 +12,4 @@
 dataset.define_population(has_registration)
 
 dataset.sex = patients.sex
+dataset.age = patients.age_on(index_date)
diff --git a/analysis/report.py b/analysis/report.py
@@ -0,0 +1,6 @@
+import pandas as pd
+
+data = pd.read_csv("output/dataset.csv.gz")
+
+fig = data.age.plot.hist().get_figure()
+fig.savefig("output/report.png")
diff --git a/project.yaml b/project.yaml
@@ -6,3 +6,10 @@ actions:
     outputs:
       highly_sensitive:
         dataset: output/dataset.csv.gz
+
+  generate_report:
+    run: python:v2 python analysis/report.py
+    needs: [generate_dataset]
+    outputs:
+      moderately_sensitive:
+        chart: output/report.png

Original file line number	Diff line number	Diff line change
`@@ -12,3 +12,4 @@`
`12`	`12`	`dataset.define_population(has_registration)`
`13`	`13`
`14`	`14`	`dataset.sex = patients.sex`
	`15`	`+dataset.age = patients.age_on(index_date)`