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JoshLoeckerJoshLoecker
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refactor: use lowercase names
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
1 parent 9c71754 commit 4142156

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Lines changed: 4 additions & 4 deletions

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‎main/como/merge_xomics.py‎

Lines changed: 4 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -596,10 +596,10 @@ async def merge_xomics( # noqa: C901
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# fmt: off
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source_data = {
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SourceTypes.TRNA: (trna_matrix_or_filepath, trna_boolean_matrix_or_filepath, trna_metadata_filepath_or_df, output_trna_activity_filepath),
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SourceTypes.MRNA: (mrna_matrix_or_filepath, mrna_boolean_matrix_or_filepath, mrna_metadata_filepath_or_df, output_mrna_activity_filepath),
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SourceTypes.SCRNA: (scrna_matrix_or_filepath, scrna_boolean_matrix_or_filepath, scrna_metadata_filepath_or_df, output_scrna_activity_filepath), # noqa: E501
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SourceTypes.PROTEOMICS: (proteomic_matrix_or_filepath, proteomic_boolean_matrix_or_filepath, proteomic_metadata_filepath_or_df, output_proteomic_activity_filepath), # noqa: E501
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SourceTypes.trna: (trna_matrix_or_filepath, trna_boolean_matrix_or_filepath, trna_metadata_filepath_or_df, output_trna_activity_filepath),
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SourceTypes.mrna: (mrna_matrix_or_filepath, mrna_boolean_matrix_or_filepath, mrna_metadata_filepath_or_df, output_mrna_activity_filepath),
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SourceTypes.scrna: (scrna_matrix_or_filepath, scrna_boolean_matrix_or_filepath, scrna_metadata_filepath_or_df, output_scrna_activity_filepath), # noqa: E501
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SourceTypes.proteomics: (proteomic_matrix_or_filepath, proteomic_boolean_matrix_or_filepath, proteomic_metadata_filepath_or_df, output_proteomic_activity_filepath), # noqa: E501
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}
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# fmt: on
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for source in source_data:

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