R-CMD-check.yaml

Add doi links to README.md and update permissions in AGENTS.md #107

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Job	Run time
ubuntu-latest (release)	3m 21s
ubuntu-latest (oldrel-1)	3m 15s
windows-latest (release)	4m 50s
macos-latest (release)	2m 45s
ubuntu-latest (devel)	3m 34s
	17m 45s