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1 parent c2b7bdd commit bd88f3aCopy full SHA for bd88f3a
1 file changed
.travis.yml
@@ -39,8 +39,8 @@ before_script:
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script:
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- ./setup.sh ~/wtsi-opt
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- - ~/wtsi-opt/bin/samtools view # dump usage to show intact
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- - ~/wtsi-opt/bin/diff_bams -h
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- - ~/wtsi-opt/bin/reheadSQ -h
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- - ~/wtsi-opt/bin/bam_stats -h
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- - ~/wtsi-opt/bin/bwa_mem.pl -h
+ - $HOME/wtsi-opt/bin/samtools view # dump usage to show intact
+ - $HOME/wtsi-opt/bin/diff_bams -h
+ - $HOME/wtsi-opt/bin/reheadSQ -h
+ - $HOME/wtsi-opt/bin/bam_stats -h
+ - perl -I $HOME/wtsi-opt/lib/perl5 ~/wtsi-opt/bin/bwa_mem.pl -h
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