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Error when running PCAWG pipeline

Status: Open.

#27 In ICGC-TCGA-PanCancer/Seqware-BWA-Workflow;

· ashraf123456789 opened on Aug 9, 2023

Remove unneeded params in CWL

Status: Open.

#23 In ICGC-TCGA-PanCancer/Seqware-BWA-Workflow;

· junjun-zhang opened on Apr 5, 2019

add doc to checker-workflow-wrapping-workflow.cwl

Status: Open.

#17 In ICGC-TCGA-PanCancer/Seqware-BWA-Workflow;

· junjun-zhang opened on Sep 21, 2018

Test next version of Seqware-BWA-Workflow with new reference data

Status: Open.

#14 In ICGC-TCGA-PanCancer/Seqware-BWA-Workflow;

· denis-yuen opened on Feb 23, 2017

running this workflow using new configuration file

Status: Open.

#9 In ICGC-TCGA-PanCancer/Seqware-BWA-Workflow;

· manuelgarvan opened on Aug 8, 2016

No way to override '-T 0' in bwa mem

Status: Open.

#8 In ICGC-TCGA-PanCancer/Seqware-BWA-Workflow;

· keiranmraine opened on May 4, 2016

when add autodie to gnos_upload_data.pl error is thown

Status: Open.

#2 In ICGC-TCGA-PanCancer/Seqware-BWA-Workflow;

· adamjohnwright opened on Jul 29, 2015