Add a local ORCIDIO mirror.

If `orcidio_support` is enabled, then instead of reading ORCIDIO from
its online location whenever we build the `orcidio_import` module, we
download the ontology separately and store it alongside the other
mirrored ontologies in `$(MIRRORDIR)`.

This allows (1) refreshing the import under MIR=false (to take into
account new ORCID references in the -edit file, but without refreshing
the ORCID mirror), and (2) avoiding rebuilding the import module just
because the ORCIDIO mirror has been refreshed, if there has been no
changes to the actual contents of ORCIDIO.

Author: gouttegd

src/incatools/odk/templates/src/ontology/Makefile.jinja2

@@ -249,7 +249,7 @@ IMPORTS = {% for imp in project.import_group.products %} {{ imp.id }}{% endfor %
 {% else %}
 IMPORTS =
 {% endif %}
-IMPORT_ROOTS = {% if project.import_group.use_base_merging %} $(IMPORTDIR)/merged_import{% else %}$(patsubst %, $(IMPORTDIR)/%_import, $(IMPORTS)){% endif %}{% if project.orcidio_support %} $(IMPORTDIR)//orcidio_import{% endif %}
+IMPORT_ROOTS = {% if project.import_group.use_base_merging %} $(IMPORTDIR)/merged_import{% else %}$(patsubst %, $(IMPORTDIR)/%_import, $(IMPORTS)){% endif %}{% if project.orcidio_support %} $(IMPORTDIR)/orcidio_import{% endif %}
 IMPORT_OWL_FILES = $(foreach n,$(IMPORT_ROOTS), $(n).owl)
 {%- if project.import_group.export_obo %}
 IMPORT_OBO_FILES = $(foreach n,$(IMPORT_ROOTS), $(n).obo)
@@ -792,12 +792,28 @@ no-mirror-refresh-%:
 # ----------------------------------------
 
 ifeq ($(IMP),true)
-$(IMPORTDIR)/orcidio_import.owl: $(SRCMERGED) | all_robot_plugins
-	$(ROBOT) odk:extract-orcids -i $(SRCMERGED) \
+$(IMPORTDIR)/orcidio_import.owl: $(SRCMERGED) $(MIRRORDIR)/orcidio.owl | all_robot_plugins
+	$(ROBOT) odk:extract-orcids --input $(SRCMERGED) \
+	                            --orcid-file $(MIRRORDIR)/orcidio.owl \
 		 $(ANNOTATE_CONVERT_FILE)
 
 endif
 
+ifeq ($(MIR),true)
+.PHONY: download-mirror-orcidio
+download-mirror-orcidio: | $(TMPDIR) $(MIRRORDIR)
+	@odk-helper download --output $(TMPDIR)/$@.owl \
+	                    --reference $(MIRRORDIR)/orcidio.owl{% if project.import_group is defined %} \
+	                    --max-retry {{ project.import_group.mirror_retry_download }}{% endif %} \
+	                    https://w3id.org/orcidio/orcidio.owl
+
+$(MIRRORDIR)/orcidio.owl: download-mirror-orcidio
+	@if [ -f $(TMPDIR)/download-mirror-orcidio.owl ]; then \
+		cp $(TMPDIR)/download-mirror-orcidio.owl $@ ; \
+	fi
+
+endif
+
 {% endif -%}
 
 {% if project.components is not none -%}