update-epm.yml

name: Update OBO Extended Prefix Map
on:
  workflow_dispatch:
  schedule:
    - cron: "0 12 * * 1"
jobs:
  update_context:
    runs-on: ubuntu-latest
    steps:
      - name: Checkout
        uses: actions/checkout@v3
        
      - name: Work around permission issue
        run: git config --global --add safe.directory "$GITHUB_WORKSPACE"

      - name: Update OBO context
        run: |
          wget "https://raw.githubusercontent.com/biopragmatics/bioregistry/main/exports/contexts/obo.epm.json" -O resources/obo.epm.json

      - name: Create Pull Request
        uses: peter-evans/create-pull-request@v3
        if: ${{ success() }}
        with:
          branch: update-obo-epm
          delete-branch: true
          commit-message: Update OBO Extended Prefix Map from Bioregistry.
          title: 'Update OBO Extended Prefix Map'
          body: |
            This pull request updates OBO extended prefix map (epm).
          assignees: matentzn