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333 lines (282 loc) · 10.3 KB
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"""
Script to extract all kinds of metrics for analysis
NB. Requires a "v{version}_dataset.csv" file in the data folder that can be created with create_dataset.py
"""
from tqdm import tqdm
import argparse
from pathlib import Path
from typing import Callable, Literal, Optional
import polars as pl
import textdescriptives as td
import textstat
import statistics
import torch
import math
from minicons import scorer
from utils.text_process import _split_text_into_sents
def input_parse():
parser = argparse.ArgumentParser()
# add arguments
parser.add_argument(
"--metrics_pipeline",
type=str,
help="Specify which metrics to extract",
choices=["textdescriptives", "textstats", "surprisal", "all"],
default="all",
)
# save arguments to be parsed from the CLI
args = parser.parse_args()
return args
def extract_td(
df: pl.DataFrame,
text_col_name: str = "content",
spacy_model: str = "es_core_news_md",
metrics: list[str] = [
"descriptive_stats",
"dependency_distance",
"pos_proportions",
"quality",
"coherence",
],
metrics_dir: Path = None,
metrics_file_name: str = None,
) -> pl.DataFrame:
"""
Extract TextDescriptives metrics
"""
print(f"[INFO:] Extracting metrics using {spacy_model} and TextDescriptives")
metrics_df = td.extract_metrics(
text=df[text_col_name], spacy_model=spacy_model, metrics=metrics
)
# convert to polars
metrics_df = pl.from_pandas(metrics_df)
# drop col
metrics_df = metrics_df.drop("text")
# concat
combined_df = pl.concat([df, metrics_df], how="horizontal")
if metrics_dir is not None and metrics_file_name is not None:
metrics_dir.mkdir(parents=True, exist_ok=True)
combined_df.write_csv(metrics_dir / metrics_file_name)
else:
print(
"[WARNING:] No metrics_dir or metrics_file_name provided. Metrics not saved."
)
return combined_df
def extract_textstat(
df: pl.DataFrame,
lang: str = "es",
stats: list[Callable[[str], float]] = [
textstat.fernandez_huerta,
textstat.szigriszt_pazos,
textstat.gutierrez_polini,
textstat.crawford,
textstat.flesch_kincaid_grade,
],
metrics_dir: Path = None,
metrics_file_name: str = None,
) -> pl.DataFrame:
"""
Extract textstat statistics
"""
print(f"[INFO:] Extracting metrics using textstat for language '{lang}'")
for stat in stats:
df = df.with_columns(
pl.col("content")
.map_elements(
lambda x: stat(x) if isinstance(x, str) else None,
return_dtype=pl.Float64,
)
.alias(stat.__name__) # name column after function
)
if metrics_dir is not None and metrics_file_name is not None:
metrics_dir.mkdir(parents=True, exist_ok=True)
df.write_csv(metrics_dir / metrics_file_name)
else:
print(
"[WARNING:] No metrics_dir or metrics_file_name provided. Metrics not saved."
)
return df
def extract_surprisal_sents(
sents: list[str],
model: Optional[scorer.MaskedLMScorer] = None,
model_id: Optional[str] = "gpt2",
device: Optional[Literal["cpu", "cuda", "auto"]] = "auto",
batch_size: Optional[int] = None
) -> list[float]:
"""
Extract surprisal scores for a list of sentences with improved memory management.
Args:
sents (list[str]): List of sentences to process
model (Optional[scorer.MaskedLMScorer]): Pre-loaded model
model_id (str): Model identifier
device (str): Device to run the model on
batch_size (Optional[int]): Batch size for processing
Returns:
list[float]: Surprisal scores for input sentences
"""
if model is None:
print(f"[INFO:] Loading model '{model_id}' on device '{device}'")
model = scorer.MaskedLMScorer(
model_id,
device,
trust_remote_code=True,
torch_dtype=torch.float16,
batch_size=batch_size or len(sents)
)
# process all sentences in one go or in specified batch size
batch_size = batch_size or len(sents)
all_surprisal_scores = []
for i in range(0, len(sents), batch_size):
batch = sents[i:i + batch_size]
try:
with torch.no_grad():
torch.cuda.empty_cache() # clear mem before processing
surprisal_scores = model.sequence_score(
batch,
reduction=lambda x: -x.mean(0).item()
)
all_surprisal_scores.extend(surprisal_scores)
except Exception as e:
print(f"Error processing batch {i//batch_size}: {e}")
# fallback to processing individual sentences if batch fails (not really helpful if batch_size is 1)
for sent in batch:
try:
with torch.no_grad():
torch.cuda.empty_cache()
score = model.sequence_score(
[sent],
reduction=lambda x: -x.mean(0).item()
)[0]
all_surprisal_scores.append(score)
except Exception as e:
print(f"Error processing sentence: {sent}")
all_surprisal_scores.append(float('nan'))
# clear mem after each batch
del batch
torch.cuda.empty_cache()
return all_surprisal_scores
def extract_surprisal(
df: pl.DataFrame,
text_col: str = "content",
model_id: Optional[str] = "gpt2",
device: Optional[Literal["cpu", "cuda", "auto"]] = "auto",
metrics_dir: Optional[Path] = None,
metrics_file_name: Optional[str] = None,
batch_size: Optional[int] = None,
) -> pl.DataFrame:
"""
Extract surprisal metrics at the paragraph level with improved error handling.
Args:
df (pl.DataFrame): Input DataFrame
text_col (str): Column containing text
model_id (str): Model identifier
device (str): Device to run the model on
metrics_dir (Optional[Path]): Directory to save metrics
metrics_file_name (Optional[str]): Filename for metrics
batch_size (Optional[int]): Batch size for processing
Returns:
pl.DataFrame: DataFrame with surprisal metrics
"""
# Determine device
device = "cuda" if torch.cuda.is_available() and device == "auto" else device
# Load model once to avoid reloading it for each row
model = scorer.MaskedLMScorer(
model_id,
device,
trust_remote_code=True,
torch_dtype=torch.float16
)
# Preprocess text into sentences
df = df.with_columns(
sents=pl.col(text_col).map_elements(
_split_text_into_sents,
return_dtype=pl.List(pl.String)
)
)
# manual processing
sents_list = df["sents"].to_list()
surprisal_scores = []
print(f"[INFO:] Extracting surprisal metrics using model '{model_id}'")
for sents in tqdm(sents_list, desc="Computing surprisal"):
try:
batch_scores = extract_surprisal_sents(
sents,
model=model,
batch_size=batch_size
)
surprisal_scores.append(batch_scores)
except Exception as e:
print(f"Error processing sentences: {e}")
# append empty scores
surprisal_scores.append([float('nan')] * len(sents))
# add surprisal scores
df = df.with_columns(
pl.Series(name="surprisal_per_sentence", values=surprisal_scores)
)
# compute mean and median surprisal with error handling
print("[INFO:] Computing means, medians")
df = df.with_columns(
surprisal_mean=pl.col("surprisal_per_sentence").map_elements(
lambda x: statistics.mean([v for v in x if not math.isnan(v)]) if any(not math.isnan(v) for v in x) else float('nan'),
return_dtype=pl.Float64
),
surprisal_median=pl.col("surprisal_per_sentence").map_elements(
lambda x: statistics.median([v for v in x if not math.isnan(v)]) if any(not math.isnan(v) for v in x) else float('nan'),
return_dtype=pl.Float64
),
)
# Convert sentences and surprisal scores to storable format
df = df.with_columns(
sents=pl.col("sents").map_elements(
lambda x: "[" + ", ".join(f'"{s}"' for s in x) + "]",
return_dtype=pl.String
),
surprisal_per_sentence=pl.col("surprisal_per_sentence").map_elements(
lambda x: "[" + ", ".join(map(str, x)) + "]",
return_dtype=pl.String
),
)
# Save results if directories are provided
if metrics_dir is not None and metrics_file_name is not None:
metrics_dir.mkdir(parents=True, exist_ok=True)
df.write_csv(metrics_dir / metrics_file_name)
return df
def main():
args = input_parse()
data_path = Path(__file__).parents[1] / "data"
metrics_dir = Path(__file__).parents[1] / "metrics"
version = 3.0
# surprisal settings
device = "cuda" if torch.cuda.is_available() else "cpu"
model_id = "EuroBERT/EuroBERT-210m"
# read data
df = pl.read_csv(data_path / f"v{version}_dataset.csv")
if args.metrics_pipeline == "all":
metrics_to_extract = ["surprisal", "textdescriptives", "textstats"]
else:
metrics_to_extract = [args.metrics_pipeline]
for metric in metrics_to_extract:
if metric == "textdescriptives":
extract_td(
df,
metrics_dir=metrics_dir,
metrics_file_name=f"v{version}_textdescriptives.csv",
)
elif metric == "textstats":
extract_textstat(
df,
metrics_dir=metrics_dir,
metrics_file_name=f"v{version}_text_stats.csv",
)
elif metric == "surprisal":
extract_surprisal(
df,
device=device,
model_id=model_id,
metrics_dir=metrics_dir,
metrics_file_name=f"v{version}_surprisal.csv",
)
else:
print(["[ERROR:] Invalid metric pipeline."])
if __name__ == "__main__":
main()