add workflow to help syncing to claude-scienfific-skills on new release trigger

Author: fedorov

.github/workflows/sync-to-scientific-skills.yml

@@ -0,0 +1,78 @@
+name: Sync to Claude Scientific Skills
+
+on:
+  release:
+    types: [published]
+
+jobs:
+  sync:
+    runs-on: ubuntu-latest
+    permissions:
+      contents: write
+    steps:
+      - name: Checkout this repository
+        uses: actions/checkout@v4
+        with:
+          path: idc-skill
+
+      - name: Extract version from release tag
+        id: version
+        run: echo "version=${GITHUB_REF#refs/tags/v}" >> $GITHUB_OUTPUT
+
+      - name: Clone upstream claude-scientific-skills
+        run: |
+          git clone https://github.com/K-Dense-AI/claude-scientific-skills.git scientific-skills
+
+      - name: Update skill files
+        run: |
+          # Target directory in the scientific-skills repo
+          TARGET_DIR="scientific-skills/scientific-skills/imaging-data-commons"
+
+          # Remove existing files
+          rm -rf "$TARGET_DIR"
+          mkdir -p "$TARGET_DIR"
+
+          # Copy SKILL.md and references directory
+          cp idc-skill/SKILL.md "$TARGET_DIR/"
+          cp -r idc-skill/references "$TARGET_DIR/"
+
+          echo "Updated files in $TARGET_DIR:"
+          ls -la "$TARGET_DIR"
+
+      - name: Create branch with updated skill
+        id: create-branch
+        run: |
+          cd scientific-skills
+
+          BRANCH_NAME="update-idc-skill-to-v${{ steps.version.outputs.version }}"
+
+          git config user.name "github-actions[bot]"
+          git config user.email "github-actions[bot]@users.noreply.github.com"
+
+          git checkout -b "$BRANCH_NAME"
+          git add scientific-skills/imaging-data-commons/
+
+          # Check if there are changes to commit
+          if git diff --staged --quiet; then
+            echo "No changes to commit"
+            echo "has_changes=false" >> $GITHUB_OUTPUT
+            exit 0
+          fi
+
+          git commit -m "Update imaging-data-commons skill to v${{ steps.version.outputs.version }}"
+          echo "has_changes=true" >> $GITHUB_OUTPUT
+          echo "branch_name=$BRANCH_NAME" >> $GITHUB_OUTPUT
+
+      - name: Push branch to idc-claude-skill repo
+        if: steps.create-branch.outputs.has_changes == 'true'
+        run: |
+          cd scientific-skills
+
+          BRANCH_NAME="${{ steps.create-branch.outputs.branch_name }}"
+
+          # Add this repo as a remote and push the branch there
+          git remote add idc-repo https://x-access-token:${{ secrets.GITHUB_TOKEN }}@github.com/${{ github.repository }}.git
+          git push idc-repo "$BRANCH_NAME"
+
+          echo "::notice::Pushed branch '$BRANCH_NAME' to ${{ github.repository }}"
+          echo "::notice::Create PR at: https://github.com/K-Dense-AI/claude-scientific-skills/compare/main...${{ github.repository_owner }}:claude-scientific-skills:$BRANCH_NAME"

SKILL.md

@@ -1171,6 +1171,6 @@ columns = [(c['name'], c['type'], c.get('description', '')) for c in schema['col
 
 ### Skill Updates
 
-This skill is version 1.0.0. To check for updates:
+This skill version is available in skill metadata. To check for updates:
 - Visit the [releases page](https://github.com/ImagingDataCommons/idc-claude-skill/releases)
 - Watch the repository on GitHub (Watch → Custom → Releases)