Merge pull request #5829 from blowekamp/fix-doxygen-group-warnings

DOC: Fix invalid Doxygen \ingroup references across ~66 headers

Author: blowekamp

Documentation/Doxygen/Modules.dox

@@ -114,6 +114,16 @@
   \sa itk::Mesh
 */
 
+/**
+  \defgroup QEMeshModifierFunctions QuadEdge Mesh Modifier Functions
+  \ingroup MeshFilters
+
+  QuadEdge mesh modifier functions implement small, targeted modifications to
+  QuadEdge meshes such as Euler operators (e.g., join/split vertex, flip edge).
+
+  \sa itk::QuadEdgeMesh
+*/
+
 /**
   \defgroup IntensityImageFilters Intensity Image Filters
   \ingroup ImageFilters
@@ -393,10 +403,6 @@
   \ingroup DataProcessing
 */
 
-  \defgroup ITKTransform Transforms
-  \ingroup DataProcessing
-*/
-
 /**
   \defgroup ImageAdaptors Image Adaptors
   \ingroup DataProcessing
@@ -519,6 +525,14 @@
   Basic operating system related system objects in ITK.
 */
 
+/**
+  \defgroup LoggingObjects Logging Objects
+  \ingroup OSSystemObjects
+
+  Objects implementing a logging framework for reporting messages,
+  warnings, and errors during ITK processing.
+*/
+
 /**
   \defgroup ThreadSafetyGroup Thread Safety
 

Modules/Core/Common/include/itkBuildInformation.h

@@ -38,7 +38,6 @@ namespace itk
  * and other static information) that can be gathered
  * at configuration time.
  *
- * \ingroup Common
  * \ingroup ITKCommon
  *
  */
@@ -63,7 +62,6 @@ class ITKCommon_EXPORT BuildInformation final : public Object
   /**
    * \class InformationValueType
    * An inner struct to organize dictionary values with descriptions
-   * \ingroup Common
    * \ingroup ITKCommon
    */
   class InformationValueType

Modules/Core/Common/include/itkImageConstIterator.h

@@ -49,7 +49,6 @@ namespace itk
  * the data is arranged in a 1D array as if it were [][][][slice][row][col]
  * with Index[0] = col, Index[1] = row, Index[2] = slice, etc.
  *
- * \ingroup ImageConstIterators
  * \par MORE INFORMATION
  * For a complete description of the ITK Image Iterators and their API, please
  * see the Iterators chapter in the ITK Software Guide.  The ITK Software Guide

Modules/Core/Common/include/itkLoggerOutput.h

@@ -44,7 +44,7 @@ namespace itk
  * \author Hee-Su Kim, Compute Science Dept. Kyungpook National University,
  *                     ISIS Center, Georgetown University.
  *
- * \ingroup OSSystemObjects
+ * \ingroup OSSystemObjects LoggingObjects
  * \ingroup ITKCommon
  */
 class ITKCommon_EXPORT LoggerOutput : public OutputWindow

Modules/Core/Common/include/itkMersenneTwisterRandomVariateGenerator.h

@@ -110,7 +110,6 @@ namespace itk::Statistics
  * rjwagner at writeme dot com and Cokus at math dot washington dot edu
  * when you write.
  *
- * \ingroup Common
  * \ingroup ITKCommon
  *
  * \sphinx

Modules/Core/Common/include/itkRandomVariateGeneratorBase.h

@@ -25,7 +25,6 @@ namespace itk::Statistics
 /** \class RandomVariateGeneratorBase
  * \brief Defines common interfaces for random variate generators.
  *
- * \ingroup Common
  * \ingroup ITKCommon
  */
 class ITKCommon_EXPORT RandomVariateGeneratorBase : public Object

Modules/Core/Common/include/itkStdStreamLogOutput.h

@@ -35,7 +35,7 @@ namespace itk
  *                     ISIS Center, Georgetown University.
  *
  *
- *  \ingroup OSSystemObjects LoggingObjects
+ * \ingroup OSSystemObjects
  * \ingroup ITKCommon
  */
 

Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h

@@ -123,7 +123,7 @@ namespace itk
  * ApplyUpdate adds the buffer values to the output image (solution). The
  * boolean Halt() (or ThreadedHalt()) method returns a true value to stop iteration.
  *
- * \ingroup ImageFilter
+ * \ingroup ImageFilters
  * \ingroup LevelSetSegmentation
  *
  * \sa DenseFiniteDifferenceImageFilter

Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshEulerOperatorSplitFacetFunction.h

@@ -28,7 +28,7 @@ namespace itk
  * new edge joining h->Destination() to g->Destination(), thus splitting
  * the original Left().
  *
- * \ingroup QuadEdgeMeshModifierFunctions
+ * \ingroup QEMeshModifierFunctions
  * \ingroup ITKQuadEdgeMesh
  */
 template <typename TMesh, typename TQEType>

Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshEulerOperatorSplitVertexFunction.h

@@ -32,7 +32,7 @@ namespace itk
  *
  * \sa QuadEdgeMeshEulerOperatorJoinVertexFunction
  *
- * \ingroup QuadEdgeMeshModifierFunctions
+ * \ingroup QEMeshModifierFunctions
  * \ingroup ITKQuadEdgeMesh
  */
 template <typename TMesh, typename TQEType>