tubeConvertImagesToCSV.h

/*=========================================================================

Library:   TubeTK

Copyright 2010 Kitware Inc. 28 Corporate Drive,
Clifton Park, NY, 12065, USA.

All rights reserved.

Licensed under the Apache License, Version 2.0 ( the "License" );
you may not use this file except in compliance with the License.
You may obtain a copy of the License at

    https://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.

=========================================================================*/
#ifndef tubeConvertImagesToCSV_h
#define tubeConvertImagesToCSV_h

// ITK Includes
#include "itkProcessObject.h"

// TubeTK Includes
#include "tubeWrappingMacros.h"

#include "itktubeConvertImagesToCSVFilter.h"

namespace tube
{
/** \class ConvertImagesToCSV
 *
 *  \ingroup TubeTK
 */
template <class TInputImage, class TInputMask>
class ConvertImagesToCSV : public itk::ProcessObject
{
public:
  /** Standard class type alias. */
  using Self = ConvertImagesToCSV;
  using Superclass = itk::ProcessObject;
  using Pointer = itk::SmartPointer<Self>;
  using ConstPointer = itk::SmartPointer<const Self>;

  /** Method for creation through the object factory. */
  itkNewMacro(Self);

  /** Run-time type information ( and related methods ). */
  itkOverrideGetNameOfClassMacro(ConvertImagesToCSV);

  using InputMaskType = TInputMask;
  using MaskPixelType = typename InputMaskType::PixelType;

  using InputImageType = TInputImage;
  using InputPixelType = typename InputImageType::PixelType;

  using ConvertImagesToCSVFilterType = itk::tube::ConvertImagesToCSVFilter<InputImageType, InputMaskType>;

  tubeWrapSetObjectMacro(InputMask, InputMaskType, ConvertImagesToCSVFilter);
  tubeWrapGetObjectMacro(InputMask, InputMaskType, ConvertImagesToCSVFilter);
  typename ConvertImagesToCSVFilterType::VnlMatrixType
  GetOutput();
  tubeWrapGetMacro(Stride, unsigned int, ConvertImagesToCSVFilter);
  tubeWrapSetMacro(Stride, unsigned int, ConvertImagesToCSVFilter);
  tubeWrapSetMacro(NumImages, unsigned int, ConvertImagesToCSVFilter);
  tubeWrapGetMacro(NumImages, unsigned int, ConvertImagesToCSVFilter);
  tubeWrapSetMacro(NumberRows, unsigned int, ConvertImagesToCSVFilter);
  tubeWrapGetMacro(NumberRows, unsigned int, ConvertImagesToCSVFilter);
  /** Set the input image and reinitialize the list of images */
  tubeWrapSetObjectMacro(Input, InputImageType, ConvertImagesToCSVFilter);
  tubeWrapGetConstObjectMacro(Input, InputImageType, ConvertImagesToCSVFilter);
  void
  AddImage(InputImageType *);

  tubeWrapUpdateMacro(ConvertImagesToCSVFilter);

protected:
  ConvertImagesToCSV(void);
  ~ConvertImagesToCSV() {}
  void
  PrintSelf(std::ostream & os, itk::Indent indent) const override;

private:
  /** itkConvertImagesToCSVFilter parameters **/
  ConvertImagesToCSV(const Self &);
  void
  operator=(const Self &);

  // To remove warning "was hidden [-Woverloaded-virtual]"
  void
  SetInput(const DataObjectIdentifierType &, itk::DataObject *) override {};

  typename ConvertImagesToCSVFilterType::Pointer m_ConvertImagesToCSVFilter;
};
} // End namespace tube

#ifndef ITK_MANUAL_INSTANTIATION
#  include "tubeConvertImagesToCSV.hxx"
#endif

#endif // End !defined( __tubeCropImage_h )