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60 | 60 | "### Optimizers\n", |
61 | 61 | "\n", |
62 | 62 | "Several optimizer types are supported via the `SetOptimizerAsX()` methods. These include:\n", |
63 | | - "* [Exhaustive](http://www.itk.org/Doxygen/html/classitk_1_1ExhaustiveOptimizerv4.html)\n", |
64 | | - "* [Nelder-Mead downhill simplex](http://www.itk.org/Doxygen/html/classitk_1_1AmoebaOptimizerv4.html), a.k.a. Amoeba\n", |
65 | | - "* [Powell optimizer](https://itk.org/Doxygen/html/classitk_1_1PowellOptimizerv4.html)\n", |
66 | | - "* [1+1 evolutionary optimizer](https://itk.org/Doxygen/html/classitk_1_1OnePlusOneEvolutionaryOptimizerv4.html)\n", |
| 63 | + "* [Exhaustive](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1ExhaustiveOptimizerv4.html)\n", |
| 64 | + "* [Nelder-Mead downhill simplex](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1AmoebaOptimizerv4.html), a.k.a. Amoeba\n", |
| 65 | + "* [Powell optimizer](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1PowellOptimizerv4.html)\n", |
| 66 | + "* [1+1 evolutionary optimizer](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1OnePlusOneEvolutionaryOptimizerv4.html)\n", |
67 | 67 | "* Variations on gradient descent:\n", |
68 | | - " * [GradientDescent](http://www.itk.org/Doxygen/html/classitk_1_1GradientDescentOptimizerv4Template.html)\n", |
69 | | - " * [GradientDescentLineSearch](http://www.itk.org/Doxygen/html/classitk_1_1GradientDescentLineSearchOptimizerv4Template.html)\n", |
70 | | - " * [RegularStepGradientDescent](http://www.itk.org/Doxygen/html/classitk_1_1RegularStepGradientDescentOptimizerv4.html)\n", |
71 | | - "* [ConjugateGradientLineSearch](http://www.itk.org/Doxygen/html/classitk_1_1ConjugateGradientLineSearchOptimizerv4Template.html)\n", |
72 | | - "* [L-BFGS2](https://itk.org/Doxygen/html/classitk_1_1LBFGS2Optimizerv4.html) (Limited memory Broyden, Fletcher, Goldfarb, Shannon)\n", |
73 | | - "* [L-BFGS-B](http://www.itk.org/Doxygen/html/classitk_1_1LBFGSBOptimizerv4.html) (Limited memory Broyden, Fletcher, Goldfarb, Shannon - Bound Constrained) - supports the use of simple constraints.\n", |
| 68 | + " * [GradientDescent](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1GradientDescentOptimizerv4Template.html)\n", |
| 69 | + " * [GradientDescentLineSearch](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1GradientDescentLineSearchOptimizerv4Template.html)\n", |
| 70 | + " * [RegularStepGradientDescent](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1RegularStepGradientDescentOptimizerv4.html)\n", |
| 71 | + "* [ConjugateGradientLineSearch](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1ConjugateGradientLineSearchOptimizerv4Template.html)\n", |
| 72 | + "* [L-BFGS2](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1LBFGS2Optimizerv4Template.html) (Limited memory Broyden, Fletcher, Goldfarb, Shannon)\n", |
| 73 | + "* [L-BFGS-B](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1LBFGSBOptimizerv4.html) (Limited memory Broyden, Fletcher, Goldfarb, Shannon - Bound Constrained) - supports the use of simple constraints.\n", |
74 | 74 | "\n", |
75 | 75 | "\n", |
76 | 76 | "### Similarity metrics\n", |
77 | 77 | "\n", |
78 | 78 | "Several metric types are supported via the `SetMetricAsX()` methods. These include:\n", |
79 | | - "* [MeanSquares](http://www.itk.org/Doxygen/html/classitk_1_1MeanSquaresImageToImageMetricv4.html)\n", |
80 | | - "* [Demons](http://www.itk.org/Doxygen/html/classitk_1_1DemonsImageToImageMetricv4.html)\n", |
81 | | - "* [Correlation](http://www.itk.org/Doxygen/html/classitk_1_1CorrelationImageToImageMetricv4.html)\n", |
82 | | - "* [ANTSNeighborhoodCorrelation](http://www.itk.org/Doxygen/html/classitk_1_1ANTSNeighborhoodCorrelationImageToImageMetricv4.html)\n", |
83 | | - "* [JointHistogramMutualInformation](http://www.itk.org/Doxygen/html/classitk_1_1JointHistogramMutualInformationImageToImageMetricv4.html)\n", |
84 | | - "* [MattesMutualInformation](http://www.itk.org/Doxygen/html/classitk_1_1MattesMutualInformationImageToImageMetricv4.html)\n", |
| 79 | + "* [MeanSquares](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1MeanSquaresImageToImageMetricv4.html)\n", |
| 80 | + "* [Demons](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1DemonsImageToImageMetricv4.html)\n", |
| 81 | + "* [Correlation](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1CorrelationImageToImageMetricv4.html)\n", |
| 82 | + "* [ANTSNeighborhoodCorrelation](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1ANTSNeighborhoodCorrelationImageToImageMetricv4.html)\n", |
| 83 | + "* [JointHistogramMutualInformation](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1JointHistogramMutualInformationImageToImageMetricv4.html)\n", |
| 84 | + "* [MattesMutualInformation](https://docs.itk.org/projects/doxygen/en/stable/classitk_1_1MattesMutualInformationImageToImageMetricv4.html)\n", |
85 | 85 | "\n", |
86 | 86 | "\n", |
87 | 87 | "### Interpolators\n", |
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