Inspect the differences in Feature/v4.0.4 fes2014 harmo

NEMO_4.0.4_surge/cfgs/AMM7_SURGE/EXP_NOWIND_DEMO/namelist_cfg

@@ -21,7 +21,7 @@
 !-----------------------------------------------------------------------
    cn_exp      =  "AMMSRG_no"  !  experience name
    nn_it000    =       1   !  first time step
-   nn_itend    =    7008 ! 52560   !  last  time step (std 1 day = 192)
+   nn_itend    =    192 ! 7008 ! 52560   !  last  time step (std 1 day = 192)
    nn_date0    =  20170101 !  date at nit_0000 (format yyyymmdd) used if ln_rstart=F or (ln_rstart=T and nn_rstctl=0 or 1)
    nn_leapy    =       1   !  Leap year calendar (1) or not (0)
    ln_rstart   =  .false.  !  start from rest (F) or from a restart file (T)
@@ -135,7 +135,7 @@
    ln_tide     = .true.
    clname(1)     =   'M2'   !  name of constituent
    clname(2)     =   'S2'
-   clname(3)     =   'K2'
+!   clname(3)     =   'K2'
 !   clname(1) ='2N2'
 !   clname(2)='EPS2'
 !   clname(3)='J1'
@@ -175,6 +175,8 @@
 &nambdy        !  unstructured open boundaries                          (default: OFF)
 !-----------------------------------------------------------------------
    ln_bdy     = .true.
+   ln_coords_file = .true.               !  =T : read bdy coordinates from file    
+      cn_coords_file = 'bdydta/coordinates.bdy.nc'  !  bdy coordinates files
    nb_bdy         = 1                    !  number of open boundary sets
    cn_dyn2d       = 'flather'            !
    nn_dyn2d_dta   =  2                   !  = 0, bdy data are equal to the initial state
@@ -189,7 +191,7 @@
 !-----------------------------------------------------------------------
 &nambdy_tide   !  tidal forcing at open boundaries
 !-----------------------------------------------------------------------
-   filtide      = 'bdydta/AMM7_surge_bdytide_rotT_'         !  file name root of tidal forcing files
+   filtide      = 'bdydta/AMM7_surge_bdytide_FES2014_'         !  file name root of tidal forcing files
    ln_bdytide_2ddta = .false. 
 /
 !!======================================================================

NEMO_4.0.4_surge/cfgs/AMM7_SURGE/EXP_harmo/RESTARTS/README.txt

@@ -0,0 +1 @@
+directory for storing restart files

NEMO_4.0.4_surge/cfgs/AMM7_SURGE/EXP_harmo/context_nemo.xml

@@ -0,0 +1,41 @@
+<!--
+ ============================================================================================== 
+    NEMO context
+============================================================================================== 
+-->
+<context id="nemo">
+<!-- $id$ -->
+<!-- Fields definition -->
+    <field_definition src="./field_def_nemo-oce.xml"/>   <!--  NEMO ocean dynamics                     -->
+
+<!-- Files definition -->
+    <file_definition src="./file_def_nemo-oce.xml"/>     <!--  NEMO ocean dynamics                     -->
+    <!-- 
+============================================================================================================
+= grid definition = = DO NOT CHANGE =
+============================================================================================================
+    -->
+
+    <axis_definition>
+      <axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" />
+      <axis id="deptht300" axis_ref="deptht" >
+         <zoom_axis begin="0" n="35" />
+      </axis>
+      <axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" />
+      <axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" />
+      <axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" />
+      <axis id="nfloat" long_name="Float number"      unit="-"                 />
+      <axis id="icbcla"  long_name="Iceberg class"      unit="1"               />
+      <axis id="ncatice" long_name="Ice category"       unit="1"               />
+      <axis id="iax_20C" long_name="20 degC isotherm"   unit="degC"            />
+      <axis id="iax_28C" long_name="28 degC isotherm"   unit="degC"            />
+      <axis id="deptht_surface" axis_ref="deptht" >
+         <zoom_axis begin=" 0 " n=" 1 " />
+      </axis>
+    </axis_definition>
+
+    <domain_definition src="./domain_def_nemo.xml"/>
+
+    <grid_definition src="./grid_def_nemo.xml"/>
+
+</context>

NEMO_4.0.4_surge/cfgs/AMM7_SURGE/EXP_harmo/file_def_nemo-oce.xml

@@ -0,0 +1,120 @@
+<?xml version="1.0"?>
+
+    <!-- 
+============================================================================================================
+=                                           output files definition                                        =
+=                                            Define your own files                                         =
+=                                         put the variables you want...                                    =
+============================================================================================================
+    -->
+
+    <file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="10d" min_digits="4">
+
+      <file_group id="1ts" output_freq="1ts"  output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
+
+<!--
+      <file_group id="1h" output_freq="1h"  output_level="10" enabled=".TRUE."> 
+  	<file id="file19" name_suffix="_SSH" description="ocean T grid variables" >
+    	 <field field_ref="ssh"          name="zos"   />
+  	</file>
+      </file_group>
+-->
+
+      <file_group id="tidal_harmonics" output_freq="1h"  output_level="10" enabled=".TRUE."> 
+        <file id="tidalanalysis.grid_T" name="harmonic_grid_T" description="ocean T grid variables"  enabled=".TRUE.">
+
+         <!-- tidal composante diaharmana SSH -->
+	  <field field_ref="M2amp_ssh"         name="M2amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="M2pha_ssh"       name="M2pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="S2amp_ssh"         name="S2amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="S2pha_ssh"       name="S2pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="N2amp_ssh"         name="N2amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="N2pha_ssh"       name="N2pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="K1amp_ssh"         name="K1amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="K1pha_ssh"       name="K1pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="O1amp_ssh"         name="O1amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="O1pha_ssh"       name="O1pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="Q1amp_ssh"         name="Q1amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="Q1pha_ssh"       name="Q1pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="K2amp_ssh"         name="K2amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="K2pha_ssh"       name="K2pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="P1amp_ssh"         name="P1amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="P1pha_ssh"       name="P1pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="M4amp_ssh"         name="M4amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="M4pha_ssh"       name="M4pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="MS4amp_ssh"         name="MS4amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="MS4pha_ssh"       name="MS4pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="MN4amp_ssh"         name="MN4amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="MN4pha_ssh"       name="MN4pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="MFamp_ssh"         name="Mfamp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="MFpha_ssh"       name="Mfpha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="MMamp_ssh"         name="Mmamp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="MMpha_ssh"       name="Mmpha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="T2amp_ssh"         name="T2amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="T2pha_ssh"       name="T2pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="L2amp_ssh"         name="L2amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="L2pha_ssh"       name="L2pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="S1amp_ssh"         name="S1amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="S1pha_ssh"       name="S1pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="2N2amp_ssh"         name="2N2amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="2N2pha_ssh"       name="2N2pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="MU2amp_ssh"         name="MU2amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="MU2pha_ssh"       name="MU2pha_ssh"     operation="instant" enabled=".TRUE." />
+          <field field_ref="NU2amp_ssh"         name="NU2amp_ssh"       operation="instant" enabled=".TRUE." />
+          <field field_ref="NU2pha_ssh"       name="NU2pha_ssh"     operation="instant" enabled=".TRUE." />
+        </file>
+      </file_group>
+
+      <file_group id="2h" output_freq="2h"  output_level="10" enabled=".TRUE."/> <!-- 2h files -->
+      <file_group id="3h" output_freq="3h"  output_level="10" enabled=".TRUE."/> <!-- 3h files -->     
+      <file_group id="4h" output_freq="4h"  output_level="10" enabled=".TRUE."/> <!-- 4h files -->
+      <file_group id="6h" output_freq="6h"  output_level="10" enabled=".TRUE."/> <!-- 6h files -->     
+      <file_group id="1d" output_freq="1d"  output_level="10" enabled=".TRUE."/> <!-- 1d files -->
+      <file_group id="3d" output_freq="3d"  output_level="10" enabled=".TRUE."/> <!-- 3d files -->
+      <file_group id="5d" output_freq="5d"  output_level="10" enabled=".TRUE."/>  <!-- 5d files -->   
+
+
+
+
+
+
+
+      <file_group id="tidal_harmonics" output_freq="1h"  output_level="10" enabled=".TRUE."> <!-- 1d files -->
+<!--
+        <file id="tidalanalysis.grid_T" name="harmonic_grid_T" description="ocean T grid variables"  enabled=".TRUE.">
+
+          <field field_ref="O1amp"         name="O1amp"       operation="instant" enabled=".TRUE." />
+          <field field_ref="O1phase"       name="O1phase"     operation="instant" enabled=".TRUE." />
+          <field field_ref="K1amp"         name="K1amp"       operation="instant" enabled=".TRUE." />
+          <field field_ref="K1phase"       name="K1phase"     operation="instant" enabled=".TRUE." />
+          <field field_ref="Q1amp"         name="Q1amp"       operation="instant" enabled=".TRUE." />
+          <field field_ref="Q1phase"       name="Q1phase"     operation="instant" enabled=".TRUE." />
+          <field field_ref="P1amp"         name="P1amp"       operation="instant" enabled=".TRUE." />
+          <field field_ref="P1phase"       name="P1phase"     operation="instant" enabled=".TRUE." />
+          <field field_ref="M2amp"         name="M2amp"       operation="instant" enabled=".TRUE." />
+          <field field_ref="M2phase"       name="M2phase"     operation="instant" enabled=".TRUE." />
+          <field field_ref="S2amp"         name="S2amp"       operation="instant" enabled=".TRUE." />
+          <field field_ref="S2phase"       name="S2phase"     operation="instant" enabled=".TRUE." />
+          <field field_ref="N2amp"         name="N2amp"       operation="instant" enabled=".TRUE." />
+          <field field_ref="N2phase"       name="N2phase"     operation="instant" enabled=".TRUE." />
+          <field field_ref="K2amp"         name="K2amp"       operation="instant" enabled=".TRUE." />
+          <field field_ref="K2phase"       name="K2phase"     operation="instant" enabled=".TRUE." />
+          <field field_ref="M4amp"         name="M4amp"       operation="instant" enabled=".TRUE." />
+          <field field_ref="M4phase"       name="M4phase"     operation="instant" enabled=".TRUE." />
+        </file>
+-->
+      </file_group>
+
+
+      <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->
+      <file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
+      <file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
+      <file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
+      <file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
+      <file_group id="1y"  output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files -->
+      <file_group id="2y"  output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
+      <file_group id="5y"  output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
+      <file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
+
+   </file_definition>
+

NEMO_4.0.4_surge/cfgs/AMM7_SURGE/EXP_harmo/grid_def_nemo.xml

@@ -0,0 +1,180 @@
+<!--
+============================================================================================================
+= grid definition = = DO NOT CHANGE =
+============================================================================================================
+    -->
+
+    <grid_definition>    
+
+        <!--  -->
+       <grid id="grid_T_2D" >
+         <domain domain_ref="grid_T" />
+       </grid>
+        <!--  -->
+       <grid id="grid_T_ncatice" >
+         <domain domain_ref="grid_T" />
+         <axis axis_ref="ncatice" />
+       </grid>
+        <!--  -->
+       <grid id="grid_T_3D" >
+         <domain domain_ref="grid_T" />
+         <axis axis_ref="deptht" />
+       </grid>
+        <!--  -->
+       <grid id="grid_U_2D" >
+         <domain domain_ref="grid_U" />
+       </grid>
+        <!--  -->
+       <grid id="grid_U_3D" >
+         <domain domain_ref="grid_U" />
+         <axis axis_ref="depthu" />
+       </grid>
+        <!--  -->
+       <grid id="grid_V_2D" >
+         <domain domain_ref="grid_V" />
+       </grid>
+        <!--  -->
+       <grid id="grid_V_3D" >
+         <domain domain_ref="grid_V" />
+         <axis axis_ref="depthv" />
+       </grid>
+        <!--  -->
+       <grid id="grid_W_2D" >
+         <domain domain_ref="grid_W" />
+       </grid>
+        <!--  -->
+       <grid id="grid_W_3D" >
+         <domain domain_ref="grid_W" />
+         <axis axis_ref="depthw" />
+       </grid>
+        <!--  -->
+       <grid id="grid_1point" >
+         <domain domain_ref="1point"/>
+       </grid>
+        <!--  -->
+       <grid id="grid_T_nfloat" >
+         <domain domain_ref="grid_T" />
+         <axis axis_ref="nfloat" />
+       </grid>
+        <!--  -->
+       <grid id="grid_EqT" >
+         <domain domain_ref="EqT" />
+       </grid>
+        <!--  -->
+       <grid id="grid_ptr_W_GLO">
+         <domain  domain_ref="ptr" />
+         <axis axis_ref="depthw"  />
+         <scalar>
+           <extract_axis position="0" />
+         </scalar>
+       </grid>
+
+       <grid id="grid_ptr_W_ATL">
+         <domain  domain_ref="ptr" />
+         <axis axis_ref="depthw"  />
+         <scalar>
+           <extract_axis position="1" />
+         </scalar>
+       </grid>
+
+       <grid id="grid_ptr_W_IND">
+         <domain  domain_ref="ptr" />
+         <axis axis_ref="depthw"  />
+         <scalar>
+           <extract_axis position="2" />
+         </scalar>
+       </grid>
+
+       <grid id="grid_T_SFC">
+         <domain domain_ref="grid_T" />
+         <scalar>
+           <extract_axis position="0" />
+         </scalar>
+       </grid>
+
+       <grid id="grid_T_vsum">
+         <domain domain_ref="grid_T"/>
+         <scalar>
+            <reduce_axis operation="sum" />
+         </scalar>
+       </grid>
+
+       <grid id="grid_U_vsum">
+         <domain domain_ref="grid_U"/>
+         <scalar>
+            <reduce_axis operation="sum" />
+         </scalar>
+       </grid>
+
+       <grid id="grid_V_vsum">
+         <domain domain_ref="grid_V"/>
+         <scalar>
+            <reduce_axis operation="sum" />
+         </scalar>
+       </grid>
+
+
+       <grid id="grid_T_zoom_300">
+         <domain domain_ref="grid_T" />
+         <axis axis_ref="deptht300" />
+       </grid>
+
+       <grid id="grid_U_scalar" >
+         <domain domain_ref="grid_U" />
+         <scalar/>
+       </grid>
+
+       <grid id="grid_V_scalar" >
+         <domain domain_ref="grid_V" />
+         <scalar/>
+       </grid>
+
+      <!-- scalars -->
+      <grid id="grid_scalar" >
+        <scalar/>
+      </grid>
+        <!--  -->
+       <grid id="grid_EqT" >
+         <domain id="EqT" />
+       </grid>
+        <!--  -->
+       <grid id="gznl_T_2D">
+         <domain id="ptr" />
+       </grid>
+        <!--  -->
+       <grid id="gznl_T_3D">
+         <domain id="ptr" />
+         <axis axis_ref="deptht" />
+       </grid>
+        <!--  -->
+       <grid id="gznl_W_2D">
+         <domain id="ptr" />
+       </grid>
+        <!--  -->
+       <grid id="gznl_W_3D">
+         <domain id="ptr" />
+         <axis axis_ref="depthw" />
+       </grid>
+       <grid id="vert_sum">
+         <domain id="grid_T"/>
+         <scalar>
+            <reduce_axis operation="sum" />
+         </scalar>
+       </grid>
+       <grid id="zoom_300">
+         <domain id="grid_T" />
+         <axis axis_ref="deptht300"/>
+       </grid>
+       <grid id="zoom_300_sum">
+         <domain id="grid_T" />
+         <scalar>
+            <reduce_axis operation="sum" />
+         </scalar>
+       </grid>
+       <grid id="grid_T_surface_extract">
+         <domain id="grid_T" />
+         <axis   axis_ref="deptht_surface" />
+       </grid>
+
+    </grid_definition>
+