Zarrv3 quick czireader and other fixes#97
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…anslation based on the voxel resolution
fix SmartSPIM to skip tiles with skip=0 in metadata.json
When detectSubsets() merged two sets because both views of a pair were in different sets, it would call mergeSets() but never add the pair that triggered the merge. This caused pairs to be missing from subsets. The fix adds the current pair to the merged set (which is always at the end of pairSets after mergeSets() completes). Also enhanced documentation: - Added detailed Javadoc note explaining mergeSets() behavior - Added inline comments explaining each section of mergeSets() - Added comment at fix location explaining the index logic 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
fixing small history select bug when selecting multiple setups
Signed-off-by: Stephan Preibisch <stephan.preibisch@gmx.de>
Fix the scale and translation transformations in OME-ZARR metadata
Signed-off-by: Stephan Preibisch <stephan.preibisch@gmx.de>
…or saving the zarr chunk
cgoina
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May 13, 2026
| import java.util.HashMap; | ||
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| import ch.epfl.biop.formats.in.ZeissQuickStartCZIReader; | ||
| import loci.formats.FormatTools; |
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The whole reason for this file was a bug the exists in ZeissQuickStartCZIReader in getting bitsperpixel value; I filed an issue there but I don't know when will be addressed
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