fixup! Generate reference documentation for the whole project.

Author: JohT

.github/workflows/internal-cypher-reference-documentation.yml

@@ -28,9 +28,8 @@ jobs:
         token: ${{ secrets.WORKFLOW_GIT_ACCESS_TOKEN }}
 
     - name: Generate cypher reference document
-      working-directory: cypher
       run: |
-        ./../scripts/documentation/generateCypherReference.sh
+        ./scripts/documentation/generateCypherReference.sh
 
     - name: Use git to detect changes in the regenerated document and set generated_document_changed
       run: git diff --quiet || echo "generated_document_changed=true" >> $GITHUB_ENV
@@ -43,7 +42,7 @@ jobs:
       uses: actions/upload-artifact@v6
       with:
         name: cypher-reference-document
-        path: ./cypher/CYPHER.md
+        path: ./CYPHER.md
         if-no-files-found: error
         retention-days: 5
 
@@ -57,13 +56,13 @@ jobs:
         git config --global user.email "7671054+JohT@users.noreply.github.com"
         git fetch origin
         git status
-        git add ./cypher/CYPHER.md
+        git add ./CYPHER.md
         git status
         git commit -m "${{ env.CI_COMMIT_MESSAGE }}"
         git status
         git rebase --strategy-option=theirs origin/main --verbose
         git status
-        git add ./cypher/CYPHER.md        
+        git add ./CYPHER.md        
         git status
         git commit --amend --no-edit
         git status

CHANGELOG.md

@@ -528,7 +528,7 @@ For all details see: https://github.com/JohT/code-graph-analysis-pipeline/releas
 * Analyze static code structure, dependencies, metrics, ...
 * Fully automated [pipeline](./.github/workflows/public-analyze-code-graph.yml) from tool installation and artifact download to report generation
 * Runtime and library independent automation using [shell scripts](./SCRIPTS.md)
-* Comprehensive list of [Cypher queries](./cypher/CYPHER.md)
+* Comprehensive list of [Cypher queries](./CYPHER.md)
 * Example Analysis for [AxonFramework](https://github.com/AxonFramework/AxonFramework)
 
 ### 📖 Jupyter Notebook Reports

COMMANDS.md

@@ -168,10 +168,10 @@ To further narrow down to only one report type within a specific domain:
 
 ### Generate Cypher Reference
 
-Change into the [cypher](./cypher/) directory e.g. with `cd cypher` and then execute the script [generateCypherReference.sh](./scripts/documentation/generateCypherReference.sh) with the following command:
+Execute the script [generateCypherReference.sh](./scripts/documentation/generateCypherReference.sh) from the root directory with the following command:
 
 ```script
-./../scripts/documentation/generateCypherReference.sh
+./scripts/documentation/generateCypherReference.sh
 ```
 
 ### Generate Script Reference

CYPHER.md

@@ -28,7 +28,7 @@ Curious? Explore the examples at [code-graph-analysis-examples](https://github.c
 - Automated reference document generation
 - Runtime and library independent automation using [shell scripts](./SCRIPTS.md)
 - Tested on MacOS (zsh), Linux (bash) and Windows (Git Bash)
-- Comprehensive list of [Cypher queries](./cypher/CYPHER.md)
+- Comprehensive list of [Cypher queries](./CYPHER.md)
 - Example analysis for [AxonFramework](https://github.com/AxonFramework/AxonFramework)
 - Example analysis for [react-router](https://github.com/remix-run/react-router)
 
@@ -198,7 +198,7 @@ The [Code Structure Analysis Pipeline](./.github/workflows/internal-java-code-an
 
 ## :mag: Cypher Query Reference
 
-[CYPHER.md](./cypher/CYPHER.md) lists all Cypher queries of this repository including their first comment line as a description. It can be generated as described in [Generate Cypher Reference](./COMMANDS.md#generate-cypher-reference).
+[CYPHER.md](./CYPHER.md) lists all Cypher queries of this repository including their first comment line as a description. It can be generated as described in [Generate Cypher Reference](./COMMANDS.md#generate-cypher-reference).
 > [Cypher](https://neo4j.com/docs/getting-started/cypher-intro) is Neo4j’s graph query language that lets you retrieve data from the graph.
 
 ## :globe_with_meridians: Environment Variable Reference