Merge pull request #4 from KitwareMedical/wheel-size

Author: AlexyPellegrini

.github/workflows/cd.yml

@@ -94,7 +94,6 @@ jobs:
           generate_release_notes: true
           # Attach all the downloaded wheels to the GitHub Release page
           files: ./wheelhouse/*.whl
-    
 
   upload-pypi:
     name: Push SlicerCore on PyPi
@@ -126,3 +125,34 @@ jobs:
         uses: pypa/gh-action-pypi-publish@release/v1
         with:
             packages-dir: ./wheelhouse
+
+  upload-pypi-sdk:
+    name: Push SlicerCoreSDK on PyPi
+    needs: [release-first, release-all]
+    runs-on: ubuntu-latest
+    environment:
+      name: pypi
+      url: https://pypi.org/p/slicer-core-sdk
+    permissions:
+      id-token: write # IMPORTANT: mandatory for trusted publishing
+      contents: write # IMPORTANT: mandatory for making GitHub Releases
+
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Download all wheel artifacts
+        uses: actions/download-artifact@v4
+        with:
+          path: ./wheelhouse
+          pattern: slicer_core_sdk-*
+          merge-multiple: true # Flattens them into one directory
+
+      - name: Show downloaded wheels
+        run: ls ./wheelhouse
+
+      # https://docs.pypi.org/trusted-publishers/using-a-publisher/
+      - name: Publish package distributions to PyPI
+        uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+            packages-dir: ./wheelhouse

patch/Libs/vtkITK/CMakeLists.txt

@@ -64,7 +64,7 @@ set(classes
   vtkITKImageThresholdCalculator
   vtkITKImageWriter
   vtkITKGradientAnisotropicDiffusionImageFilter
-  #vtkITKGrowCut # Currently excluded due to being a 50Mio large object that takes 10 minutes to build
+  #vtkITKGrowCut # Currently excluded due to being a 50Mio large object that takes 10 minutes to build and consumes 10Gio of RAM
   vtkITKDistanceTransform
   vtkITKLabelShapeStatistics
   vtkITKLevelTracingImageFilter

patch/SlicerCore/CMake/SlicerCoreSuperbuild.cmake

@@ -27,6 +27,7 @@ set(CMAKE_CXX_STANDARD "17")
 set(CMAKE_CXX_STANDARD_REQUIRED "ON")
 set(CMAKE_CXX_EXTENSIONS "OFF")
 set(CMAKE_POSITION_INDEPENDENT_CODE "TRUE")
+set(CMAKE_PLATFORM_NO_VERSIONED_SONAME "TRUE")
 
 # All deps are install in a single prefix for easier finds
 set(EP_DEPENDENCIES_INSTALL_DIR "${CMAKE_BINARY_DIR}/deps-install")
@@ -51,6 +52,7 @@ mark_as_superbuild(
     CMAKE_CXX_STANDARD_REQUIRED
     CMAKE_CXX_EXTENSIONS
     CMAKE_POSITION_INDEPENDENT_CODE
+    CMAKE_PLATFORM_NO_VERSIONED_SONAME
     # forward VTK and helper prefixes
     CMAKE_PREFIX_PATH
     CMAKE_MODULE_PATH

patch/SlicerCore/README.md

@@ -1,12 +1,58 @@
 # Slicer Core
 
-SlicerCore, formally known as "VTK MRML", is an alternative build-system for the 3DSlicer project.  
+SlicerCore is an alternative build-system for the 3DSlicer project.  
 It is intended to build a Python Package (wheel) from the core libraries and loadables modules of 3DSlicer.
 
+## About Slicer
+
+Slicer, or 3D Slicer, is a free, open source software package for visualization and image analysis.
+
+3D Slicer is natively designed to be available on multiple platforms, including Windows, Linux and macOS.
+
+For 3DSlicer community announcements and support, visit:
+
+    https://discourse.slicer.org
+
+For documentation, tutorials, and more information, please see:
+
+    https://www.slicer.org
+
+For 3DSlicer source code, please see:
+
+    https://github.com/Slicer/Slicer
+
+
+## About Slicer Core
+
+Slicer Core in a single sentence:
+***Slicer Core is the Python package consisting of all 3DSlicer modules that do not depend on Qt.***
+
+Slicer Core contains the following libraries of 3DSlicer:
+- `Base/Logic`
+- `Libs/*`
+- `Modules/Loadables/[MRML|MRMLDM|Logic|VTKWidgets]`
+
+This enables using 3DSlicer powerful MRML nodes system and associated medical-oriented algorithms in pure Python.
+
+## Using Slicer Core
+
+SlicerCore provides access to the main Slicer libraries through the slicer package namespace :
+
+```py
+from slicer import vtkMRMLScalarVolumeNode
+volume_node = vtkMRMLScalarVolumeNode()
+```
+
+Although the library can be used as is, additional convenience classes are provided in the trame-slicer Python package to initialize application logic and scene, wrap 2D and 3D views, provide applications on the web and more.
+
+For more examples, please visit the **[trame-slicer](https://github.com/KitwareMedical/trame-slicer)** project.
+
 ## Documentation and Examples
 
-- **[3DSlicer API documentation](https://apidocs.slicer.org/main/index.html)**
-- **[trame-slicer](https://github.com/KitwareMedical/trame-slicer)**: slicer-core usage example.
+- **[3DSlicer Developper Guide](https://slicer.readthedocs.io/en/latest/developer_guide/index.html)**
+    - Note that only some parts of the developper guide applies to Slicer Core as some modules and classes are not available.
+- **[3DSlicer API Documentation](https://apidocs.slicer.org/main/index.html)**
+- **[Trame Slicer](https://github.com/KitwareMedical/trame-slicer)**
 
 ## Acknowledgments
 

patch/SlicerCore/pyproject.toml

@@ -13,7 +13,7 @@ cmake.args = ["-GNinja", "-DCMAKE_BUILD_TYPE=Release", "-DBUILD_SDK=OFF"]
 
 [project]
 name = "slicer-core"
-version = "5.11.0.3"
+version = "5.11.0.4"
 dependencies = ["vtk==9.6.0"]
 requires-python = ">=3.10"
 readme = "README.md"

patch/SlicerCoreSDK/pyproject.toml

@@ -13,7 +13,7 @@ cmake.args = ["-GNinja", "-DCMAKE_BUILD_TYPE=Release", "-DBUILD_SDK=ON"]
 
 [project]
 name = "slicer-core-sdk"
-version = "5.11.0.3"
+version = "5.11.0.4"
 dependencies = ["vtk==9.6.0"]
 requires-python = ">=3.10"
 description = "3DSlicer Core libraries as a python standalone project"