Deployed 00a8d08 with MkDocs version: 1.6.1

Author: caufieldjh

index.html

@@ -584,12 +584,13 @@ <h2 id="design-principles">Design Principles</h2>
 <li>should make use of ontologies from the <a href="http://www.obofoundry.org/">OBO Foundry</a>, where possible.</li>
 <li>should be responsible for the veracity of the datasets that they ingest and are responsible for keeping track of evidence and provenance for assertions in their KG.</li>
 <li>should provide their KG for download and must follow <a href="https://semver.org/">semantic versioning guidelines</a>.</li>
-<li>should provide their KG in the <a href="https://github.com/NCATS-Tangerine/kgx/blob/master/data-preparation.md">KGX interchange format</a> in addition to their format of choice.</li>
+<li>should provide their KG in the <a href="https://github.com/biolink/kgx/blob/master/docs/data-preparation.md">KGX interchange format</a> in addition to their format of choice.</li>
 <li>must have a License, Contributing guidelines, Code of Conduct, and be open to the community for contributions as well as consumption.</li>
 </ul>
 <p>Optionally, each instance of KG-Hub can also provide a Docker image such that their code can be run easily as a container.</p>
 <h2 id="core-kg-hub-projects">Core KG-Hub Projects</h2>
-<p>The table below lists core KG projects. Click headings to sort.</p>
+<p>The table below lists core KG projects.</p>
+<p>We are currently transitioning the files for these projects to new locations. See below for details.</p>
 <table>
 <thead>
 <tr>
@@ -603,43 +604,43 @@ <h2 id="core-kg-hub-projects">Core KG-Hub Projects</h2>
 <tbody>
 <tr>
 <td style="text-align: left;">kg-obo</td>
-<td style="text-align: left;">KG-OBO: OBO ontologies into KGX TSV format.</td>
+<td style="text-align: left;">TEMPORARILY UNAVAILABLE. KG-OBO: OBO ontologies into KGX TSV format.</td>
 <td style="text-align: left;">https://kghub.io/kg-obo/</td>
 <td style="text-align: left;">https://github.com/Knowledge-Graph-Hub/kg-obo</td>
 <td style="text-align: left;">nan</td>
 </tr>
 <tr>
 <td style="text-align: left;">kg-idg</td>
-<td style="text-align: left;">KG-IDG: a Knowledge Graph for Illuminating the Druggable Genome.</td>
+<td style="text-align: left;">TEMPORARILY UNAVAILABLE. KG-IDG: a Knowledge Graph for Illuminating the Druggable Genome.</td>
 <td style="text-align: left;">https://kghub.io/kg-idg/</td>
 <td style="text-align: left;">https://github.com/Knowledge-Graph-Hub/kg-idg</td>
 <td style="text-align: left;">nan</td>
 </tr>
 <tr>
 <td style="text-align: left;">kg-covid-19</td>
-<td style="text-align: left;">KG-COVID-19: a knowledge graph for COVID-19 and SARS-COV-2.</td>
+<td style="text-align: left;">TEMPORARILY UNAVAILABLE. KG-COVID-19: a knowledge graph for COVID-19 and SARS-COV-2.</td>
 <td style="text-align: left;">https://kghub.io/kg-covid-19/</td>
 <td style="text-align: left;">https://github.com/Knowledge-Graph-Hub/kg-covid-19</td>
 <td style="text-align: left;">nan</td>
 </tr>
 <tr>
 <td style="text-align: left;">kg-microbe</td>
-<td style="text-align: left;">KG-Microbe: a knowledge graph for microbial traits.</td>
+<td style="text-align: left;">TEMPORARILY UNAVAILABLE. KG-Microbe: a knowledge graph for microbial traits.</td>
 <td style="text-align: left;">https://kghub.io/kg-microbe/</td>
 <td style="text-align: left;">https://github.com/Knowledge-Graph-Hub/kg-microbe</td>
 <td style="text-align: left;">nan</td>
 </tr>
 <tr>
 <td style="text-align: left;">eco-kg</td>
-<td style="text-align: left;">eco-KG: a knowledge graph of plant traits starting with Planteome and EOL TraitBank.</td>
+<td style="text-align: left;">TEMPORARILY UNAVAILABLE. eco-KG: a knowledge graph of plant traits starting with Planteome and EOL TraitBank.</td>
 <td style="text-align: left;">https://kghub.io/eco-kg/</td>
 <td style="text-align: left;">https://github.com/Knowledge-Graph-Hub/eco-kg</td>
 <td style="text-align: left;">nan</td>
 </tr>
 <tr>
 <td style="text-align: left;">monarch</td>
 <td style="text-align: left;">Graph representation of the Monarch Initiative knowledge resource.</td>
-<td style="text-align: left;">https://kghub.io/kg-monarch/</td>
+<td style="text-align: left;">https://monarchinitiative.org/kg/downloads</td>
 <td style="text-align: left;">https://github.com/monarch-initiative</td>
 <td style="text-align: left;">nan</td>
 </tr>
@@ -652,7 +653,7 @@ <h2 id="core-kg-hub-projects">Core KG-Hub Projects</h2>
 </tr>
 <tr>
 <td style="text-align: left;">sldb</td>
-<td style="text-align: left;">A graph of synthetic lethal interactions.</td>
+<td style="text-align: left;">TEMPORARILY UNAVAILABLE. A graph of synthetic lethal interactions.</td>
 <td style="text-align: left;">https://kghub.io/sldb/</td>
 <td style="text-align: left;">https://github.com/monarch-initiative/SLDBGen</td>
 <td style="text-align: left;">nan</td>

projects.yaml

@@ -1,34 +1,34 @@
 - id: kg-obo
-  description: "KG-OBO: OBO ontologies into KGX TSV format."
+  description: "TEMPORARILY UNAVAILABLE. KG-OBO: OBO ontologies into KGX TSV format."
   url: "https://kghub.io/kg-obo/"
   repository: "https://github.com/Knowledge-Graph-Hub/kg-obo"
 - id: kg-idg
-  description: "KG-IDG: a Knowledge Graph for Illuminating the Druggable Genome."
+  description: "TEMPORARILY UNAVAILABLE. KG-IDG: a Knowledge Graph for Illuminating the Druggable Genome."
   url: "https://kghub.io/kg-idg/"
   repository: "https://github.com/Knowledge-Graph-Hub/kg-idg"
 - id: kg-covid-19
-  description: "KG-COVID-19: a knowledge graph for COVID-19 and SARS-COV-2."
+  description: "TEMPORARILY UNAVAILABLE. KG-COVID-19: a knowledge graph for COVID-19 and SARS-COV-2."
   url: "https://kghub.io/kg-covid-19/"
   repository: "https://github.com/Knowledge-Graph-Hub/kg-covid-19"
 - id: kg-microbe
-  description: "KG-Microbe: a knowledge graph for microbial traits."
+  description: "TEMPORARILY UNAVAILABLE. KG-Microbe: a knowledge graph for microbial traits."
   url: "https://kghub.io/kg-microbe/"
   repository: "https://github.com/Knowledge-Graph-Hub/kg-microbe"
 - id: eco-kg
-  description: "eco-KG: a knowledge graph of plant traits starting with Planteome and EOL TraitBank."
+  description: "TEMPORARILY UNAVAILABLE. eco-KG: a knowledge graph of plant traits starting with Planteome and EOL TraitBank."
   url: "https://kghub.io/eco-kg/"
   repository: "https://github.com/Knowledge-Graph-Hub/eco-kg"
 - id: monarch
   description: "Graph representation of the Monarch Initiative knowledge resource."
-  url: "https://kghub.io/kg-monarch/"
+  url: "https://monarchinitiative.org/kg/downloads"
   repository: "https://github.com/monarch-initiative"
 - id: kg-phenio
   description: "Graph representation of Monarch ontologies."
   url: "https://kghub.io/kg-phenio/"
   repository: "https://github.com/Knowledge-Graph-Hub/kg-phenio"
   former_id: kg-ontoml
 - id: sldb
-  description: "A graph of synthetic lethal interactions."
+  description: "TEMPORARILY UNAVAILABLE. A graph of synthetic lethal interactions."
   url: "https://kghub.io/sldb/"
   repository: "https://github.com/monarch-initiative/SLDBGen"
 - id: rna-kg

search/search_index.json

@@ -2,26 +2,26 @@
 <urlset xmlns="http://www.sitemaps.org/schemas/sitemap/0.9">
     <url>
          <loc>https://kghub.org/</loc>
-         <lastmod>2025-01-31</lastmod>
+         <lastmod>2025-12-23</lastmod>
     </url>
     <url>
          <loc>https://kghub.org/acknowledgements/</loc>
-         <lastmod>2025-01-31</lastmod>
+         <lastmod>2025-12-23</lastmod>
     </url>
     <url>
          <loc>https://kghub.org/citing/</loc>
-         <lastmod>2025-01-31</lastmod>
+         <lastmod>2025-12-23</lastmod>
     </url>
     <url>
          <loc>https://kghub.org/code_of_conduct/</loc>
-         <lastmod>2025-01-31</lastmod>
+         <lastmod>2025-12-23</lastmod>
     </url>
     <url>
          <loc>https://kghub.org/kg_obo/</loc>
-         <lastmod>2025-01-31</lastmod>
+         <lastmod>2025-12-23</lastmod>
     </url>
     <url>
          <loc>https://kghub.org/support/</loc>
-         <lastmod>2025-01-31</lastmod>
+         <lastmod>2025-12-23</lastmod>
     </url>
 </urlset>