update instructions + CI

Author: RemDelaporteMathurin

.github/workflows/ci.yml

@@ -19,10 +19,10 @@ jobs:
         use-mamba: false
         channels: conda-forge
 
-    - name: Install pytest
+    - name: Install package
       shell: bash -l {0}
       run: |
-        conda install pytest pytest-cov codecov
+        pip install -e .[dev]
 
     - name: Run tests
       shell: bash -l {0}

README.md

@@ -15,19 +15,12 @@ conda env create -f environment.yml
 conda activate libra_sparging
 ```
 
-
 ```
-python model.py
+python -m pip install -e .[dev]
 ```
 
 ## How to run tests
 
-1. Install pytest
-
-```
-python -m pip install pytest
-```
-
 ```
 python -m pytest test
 ```