update stack setup to move on from DC2

Author: heather999

jupyter-kernels/setup/stack-dc2.sh

@@ -0,0 +1,33 @@
+#!/bin/sh
+
+source /opt/lsst/software/stack/loadLSST.bash ""
+setup lsst_distrib
+[ -d "$LSST_HOME/obs_lsst" ] && setup -r $LSST_HOME/obs_lsst
+setup lsst_sims
+[ -d "$LSST_HOME/supreme" ] && setup -r $LSST_HOME/supreme -j
+export OMP_NUM_THREADS=1
+
+unset PYTHONSTARTUP
+
+export PYTHONNOUSERSITE=' '
+
+export DESC_GCR_SITE='nersc'
+
+if [ -n "$DESCPYTHONPATH" ]; then
+    export PYTHONPATH="$DESCPYTHONPATH:$PYTHONPATH"
+    echo "Including DESCPYTHONPATH: $DESCPYTHONPATH"
+    echo "Wondering Why? DESCPYTHONPATH is likely set in your $HOME/.basrhc, $HOME/.bashrc.ext, or similar config script"
+fi
+
+if [ -n "$DESCSTACKUSERENV" ]; then
+   conda activate $DESCSTACKUSERENV
+   echo "Activated your DESCSTACKUSERENV: $DESCSTACKUSERENV"
+    echo "Wondering Why? DESCSTACKUSERENV is likely set in your $HOME/.basrhc, $HOME/.bashrc.ext, or similar config script"
+fi
+
+
+export PYTHONPATH=".:$PYTHONPATH"
+
+if [ $# -gt 0 ] ; then
+    exec python -m ipykernel $@
+fi

jupyter-kernels/setup/stack-weekly.sh

@@ -4,7 +4,6 @@ source /opt/lsst/software/stack/loadLSST.bash ""
 setup lsst_distrib
 [ -d "$LSST_HOME/obs_lsst" ] && setup -r $LSST_HOME/obs_lsst
 [ -d "$LSST_HOME/supreme" ] && setup -r $LSST_HOME/supreme -j
-[ -d "/opt/lsst/software/stack/meas_pz" ] && setup -r /opt/lsst/software/stack/meas_pz -j
 
 export OMP_NUM_THREADS=1
 

jupyter-kernels/setup/stack.sh

@@ -1,10 +1,11 @@
-#!/bin/sh
+#!/bin/bash
 
 source /opt/lsst/software/stack/loadLSST.bash ""
 setup lsst_distrib
 [ -d "$LSST_HOME/obs_lsst" ] && setup -r $LSST_HOME/obs_lsst
-setup lsst_sims
 [ -d "$LSST_HOME/supreme" ] && setup -r $LSST_HOME/supreme -j
+[ -d "/opt/lsst/software/stack/meas_pz" ] && setup -r /opt/lsst/software/stack/meas_pz -j
+
 export OMP_NUM_THREADS=1
 
 unset PYTHONSTARTUP
@@ -13,6 +14,8 @@ export PYTHONNOUSERSITE=' '
 
 export DESC_GCR_SITE='nersc'
 
+export RUBIN_SIM_DATA_DIR=/global/cfs/cdirs/lsst/groups/CO/rubin_sim
+
 if [ -n "$DESCPYTHONPATH" ]; then
     export PYTHONPATH="$DESCPYTHONPATH:$PYTHONPATH"
     echo "Including DESCPYTHONPATH: $DESCPYTHONPATH"
@@ -25,6 +28,20 @@ if [ -n "$DESCSTACKUSERENV" ]; then
     echo "Wondering Why? DESCSTACKUSERENV is likely set in your $HOME/.basrhc, $HOME/.bashrc.ext, or similar config script"
 fi
 
+python_ver_major=$(python -c 'import sys; print(sys.version_info.major)')
+python_ver_minor=$(python -c 'import sys; print(sys.version_info.minor)')
+export DESCPYTHONVER="python$python_ver_major.$python_ver_minor"
+
+export PYTHONPATH=$PYTHONPATH:$LSST_INST_DIR/$LSST_PYTHON_VER
+
+if [ -n "$DESCSTACKUSERBASE" ]; then
+    export PYTHONUSERBASE=$DESCSTACKUSERBASE
+    unset PYTHONUSERSITE
+    export PATH=$PYTHONUSERBASE/bin:$PATH       
+    export PYTHONPATH="$PYTHONUSERBASE/lib/$DESCPYTHONVER/site-packages:$PYTHONPATH"
+    echo "using DESCSTACKUSERBASE: $DESCSTACKUSERBASE"
+fi
+
 
 export PYTHONPATH=".:$PYTHONPATH"