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test_dataloader.py
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637 lines (519 loc) · 21.3 KB
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import os
import sys
import pytest
import torch
from torch import tensor
from litdata.constants import _VIZ_TRACKER_AVAILABLE
from litdata.processing.functions import optimize
from litdata.streaming import (
Cache,
CombinedStreamingDataset,
ParallelStreamingDataset,
StreamingDataLoader,
StreamingDataset,
)
from litdata.streaming import dataloader as streaming_dataloader_module
class TestStatefulDataset:
def __init__(self, size, step):
self.size = size
self.step = step
self.counter = 0
self.shuffle = None
self.drop_last = None
def set_shuffle(self, shuffle):
self.shuffle = shuffle
def __len__(self):
return self.size
def __iter__(self):
self.counter = 0
return self
def __next__(self):
if self.counter == self.size:
raise StopIteration
value = self.step * self.counter
self.counter += 1
return value
def state_dict(self, *args, **kwargs):
return {"counter": self.counter}
def load_state_dict(self, state_dict):
self.counter = state_dict["counter"]
def set_epoch(self, current_epoch):
pass
def set_drop_last(self, drop_last):
self.drop_last = drop_last
def set_batch_size(self, batch_size):
self.batch_size = batch_size
def set_num_workers(self, num_workers):
self.num_workers = num_workers
class TestCombinedStreamingDataset(CombinedStreamingDataset):
def _check_datasets(self, datasets) -> None:
pass
def reset_state_dict(self):
pass
def test_streaming_dataloader():
dataset = TestCombinedStreamingDataset(
[TestStatefulDataset(10, 1), TestStatefulDataset(10, -1)],
42,
weights=(0.5, 0.5),
iterate_over_all=False,
)
dataloader = StreamingDataLoader(dataset, batch_size=2)
dataloader_iter = iter(dataloader)
batches = []
for batch in dataloader_iter:
batches.append(batch)
expected = [
tensor([0, 0]),
tensor([1, 2]),
tensor([-1, -2]),
tensor([-3, 3]),
tensor([4, 5]),
tensor([6, -4]),
tensor([7, 8]),
tensor([-5, -6]),
tensor([9, -7]),
tensor([-8]),
]
for exp, gen in zip(expected, batches):
assert torch.equal(exp, gen)
assert dataloader.state_dict() == {
"dataset": {"0": {"counter": 10}, "1": {"counter": 9}},
"current_epoch": 1,
"latest_worker_idx": 0,
"num_samples_yielded": {0: [10, 9]},
}
@pytest.mark.skip(reason="Profiling patches torch which leads to undesired test interactions")
@pytest.mark.skipif(not _VIZ_TRACKER_AVAILABLE, reason="viz tracker required")
@pytest.mark.parametrize("profile", [2, True])
def test_dataloader_profiling(profile, tmpdir, monkeypatch):
monkeypatch.setattr(streaming_dataloader_module, "_VIZ_TRACKER_AVAILABLE", True)
dataset = TestCombinedStreamingDataset(
[TestStatefulDataset(10, 1), TestStatefulDataset(10, -1)],
42,
weights=(0.5, 0.5),
iterate_over_all=False,
)
dataloader = StreamingDataLoader(
dataset, batch_size=2, profile_batches=profile, profile_dir=str(tmpdir), num_workers=1
)
dataloader_iter = iter(dataloader)
batches = []
for batch in dataloader_iter:
batches.append(batch)
assert os.path.exists(os.path.join(tmpdir, "result.json"))
def test_dataloader_shuffle():
dataset = TestCombinedStreamingDataset(
[TestStatefulDataset(10, 1), TestStatefulDataset(10, -1)], 42, weights=(0.5, 0.5), iterate_over_all=False
)
assert dataset._datasets[0].shuffle is None
assert dataset._datasets[1].shuffle is None
StreamingDataLoader(dataset, batch_size=2, num_workers=1, shuffle=True)
assert dataset._datasets[0].shuffle
assert dataset._datasets[1].shuffle
class TestStatefulDatasetDict(TestStatefulDataset):
def __next__(self):
return {"value": super().__next__()}
def custom_collate_fn(samples):
assert len(samples) == 2
assert "value" in samples[0]
return "received"
def test_custom_collate():
dataset = TestCombinedStreamingDataset(
[TestStatefulDatasetDict(10, 1), TestStatefulDatasetDict(10, -1)],
42,
weights=(0.5, 0.5),
iterate_over_all=False,
)
assert dataset._datasets[0].shuffle is None
assert dataset._datasets[1].shuffle is None
dataloader = StreamingDataLoader(dataset, batch_size=2, num_workers=0, shuffle=True, collate_fn=custom_collate_fn)
assert dataset._datasets[0].shuffle
assert dataset._datasets[1].shuffle
dataloader_iter = iter(dataloader)
assert next(dataloader_iter) == "received"
assert dataloader._num_samples_yielded_wrapper[0] == [dataset._datasets[0].counter, dataset._datasets[1].counter]
def test_custom_collate_multiworker():
dataset = TestCombinedStreamingDataset(
[TestStatefulDatasetDict(10, 1), TestStatefulDatasetDict(10, -1)],
42,
weights=(0.5, 0.5),
iterate_over_all=False,
)
assert dataset._datasets[0].shuffle is None
assert dataset._datasets[1].shuffle is None
dataloader = StreamingDataLoader(dataset, batch_size=2, num_workers=3, shuffle=True, collate_fn=custom_collate_fn)
assert dataset._datasets[0].shuffle
assert dataset._datasets[1].shuffle
dataloader_iter = iter(dataloader)
assert next(dataloader_iter) == "received"
assert dataloader._num_samples_yielded_wrapper[0] == [1, 1]
assert next(dataloader_iter) == "received"
assert dataloader._num_samples_yielded_wrapper[1] == [1, 1]
assert next(dataloader_iter) == "received"
assert dataloader._num_samples_yielded_wrapper[2] == [1, 1]
assert next(dataloader_iter) == "received"
assert dataloader._num_samples_yielded_wrapper[0] == [3, 1]
# Iterate through the remaining samples
try:
while next(dataloader_iter) == "received":
continue
except AssertionError:
assert dataloader._num_samples_yielded_wrapper == {0: [10, 8], 1: [10, 8], 2: [10, 8]}
# Try calling the state_dict. No error should follow
_state_dict = dataloader.state_dict()
def test_dataloader_no_workers(tmpdir):
cache = Cache(input_dir=str(tmpdir), chunk_bytes="64MB")
for i in range(1000):
cache[i] = i
cache.done()
cache.merge()
dataset = StreamingDataset(str(tmpdir), shuffle=True)
dataloader = StreamingDataLoader(dataset)
assert len(dataset) == 1000
assert len(dataloader) == 1000
assert len(dataset) == 1000
@pytest.mark.timeout(120)
def test_dataloader_with_loading_states(tmpdir):
cache = Cache(input_dir=str(tmpdir), chunk_bytes="64MB")
for i in range(100):
cache[i] = i
cache.done()
cache.merge()
dataset = StreamingDataset(str(tmpdir), shuffle=True)
# Test dataloader without explicit num workers
dataloader = StreamingDataLoader(dataset, batch_size=4)
dataloader.load_state_dict(dataloader.state_dict())
batch = next(iter(dataloader))
assert len(batch) == 4, "Batch size should be 4"
assert len(dataloader) == 25, "Dataloader length should be 25 (100 items / batch size 4)"
# Test dataloader with num workers
dataloader = StreamingDataLoader(dataset, batch_size=4, num_workers=2)
assert len(dataloader) == 25, "Dataloader length should be 25 (100 items / batch size 4)"
# Verify dataloader state after partial iteration
for batch_idx, batch in enumerate(dataloader):
assert dataloader.current_epoch == 1, "Current epoch should be 1"
if batch_idx == 10:
break
dataloader.load_state_dict(dataloader.state_dict())
assert dataloader.restore
# Verify remaining batches in the first epoch
count = 0
for _ in dataloader:
assert dataloader.current_epoch == 1, "Current epoch should be 1"
count += 1
# we consumed 11 batches (batch_idx==10) before.
assert count == 14, "There should be at least 14 batches remaining in the first epoch"
assert not dataloader.restore
# Verify batches in the second epoch
count = 0
for _ in dataloader:
assert dataloader.current_epoch == 2, "Current epoch should be 2"
count += 1
assert count >= 25, "There should be at least 25 batches in the second epoch"
# Verify that the datalaoder can resume after complete last epoch
dataloader.load_state_dict(dataloader.state_dict())
assert not dataloader.restore
count = 0
for _ in dataloader:
assert dataloader.current_epoch == 3, "Current epoch should be 3"
count += 1
assert count >= 25, "There should be at least 25 batches in the third epoch"
@pytest.mark.timeout(120)
def test_dataloader_states_with_persistent_workers(tmpdir):
cache = Cache(input_dir=str(tmpdir), chunk_bytes="64MB")
for i in range(100):
cache[i] = i
cache.done()
cache.merge()
dataset = StreamingDataset(str(tmpdir), shuffle=True)
dataloader = StreamingDataLoader(dataset, batch_size=4, num_workers=2)
assert len(dataloader) == 25, "Dataloader length should be 25 (100 items / batch size 4)"
# Verify dataloader state after partial iteration
for batch_idx, batch in enumerate(dataloader):
assert dataloader.current_epoch == 1, "Current epoch should be 1"
if batch_idx == 10:
break
prev_dataloader_state = dataloader.state_dict()
dataloader = StreamingDataLoader(dataset, batch_size=4, num_workers=2, persistent_workers=True)
dataloader.load_state_dict(prev_dataloader_state)
assert dataloader.restore
# Verify remaining batches in the first epoch
count = 0
for _ in dataloader:
assert dataloader.current_epoch == 1, "Current epoch should be 1"
count += 1
# batch_idx==10 means we consumed 11 batches before.
assert count == 14, "There should be at least 14 batches remaining in the first epoch"
assert not dataloader.restore
# Verify batches in the second epoch
count = 0
for _ in dataloader:
assert dataloader.current_epoch == 2, "Current epoch should be 2"
count += 1
assert count >= 25, "There should be at least 25 batches in the second epoch"
# Verify that the datalaoder can resume after complete last epoch
dataloader.load_state_dict(dataloader.state_dict())
assert not dataloader.restore
count = 0
for _ in dataloader:
assert dataloader.current_epoch == 3, "Current epoch should be 3"
count += 1
assert count >= 25, "There should be at least 25 batches in the third epoch"
@pytest.mark.timeout(90)
def test_resume_dataloader_with_new_dataset(tmpdir):
dataset_1_path = tmpdir.join("dataset_1")
dataset_2_path = tmpdir.join("dataset_2")
for dataset in [dataset_1_path, dataset_2_path]:
cache = Cache(input_dir=str(dataset), chunk_bytes="64MB")
for i in range(50):
cache[i] = i
cache.done()
cache.merge()
dataset = StreamingDataset(str(dataset_1_path), shuffle=True)
dataloader = StreamingDataLoader(dataset, batch_size=4, num_workers=2)
for _ in dataloader:
assert dataloader.current_epoch == 1, "Current epoch should be 1"
dataloader_state = dataloader.state_dict()
dataset = StreamingDataset(str(dataset_2_path), shuffle=True)
dataloader = StreamingDataLoader(dataset, batch_size=4, num_workers=2)
dataloader.load_state_dict(dataloader_state)
for _ in dataloader:
assert dataloader.current_epoch == 2, "Current epoch should be 2"
@pytest.mark.timeout(120)
def test_resume_dataloader_mid_epoch_with_new_dataset(tmpdir):
dataset_1_path = tmpdir.join("dataset_1")
dataset_2_path = tmpdir.join("dataset_2")
for dataset, start in [(dataset_1_path, 0), (dataset_2_path, 100)]:
cache = Cache(input_dir=str(dataset), chunk_bytes="64MB")
for i in range(50):
cache[i] = i + start
cache.done()
cache.merge()
dataset = StreamingDataset(str(dataset_1_path), shuffle=False)
num_workers = 0 if sys.platform == "darwin" else 2
dataloader = StreamingDataLoader(dataset, batch_size=4, num_workers=num_workers)
for batch_idx, _ in enumerate(dataloader):
if batch_idx == 2:
break
dataloader_state = dataloader.state_dict()
dataset = StreamingDataset(str(dataset_2_path), shuffle=False)
dataloader = StreamingDataLoader(dataset, batch_size=4, num_workers=num_workers, dataset_change_policy="next_epoch")
dataloader.load_state_dict(dataloader_state)
assert not dataloader.restore
first_batch = next(iter(dataloader))
assert dataloader.current_epoch == 2, "Current epoch should be 2"
assert (first_batch >= 100).all().item()
@pytest.mark.timeout(300)
def test_resume_mid_epoch_with_new_dataset_next_epoch_e2e(tmp_path):
from lightning.pytorch import LightningModule, Trainer
from lightning.pytorch.callbacks import ModelCheckpoint
def _write_dataset(path, value):
cache = Cache(input_dir=str(path), chunk_size=4)
for i in range(8):
cache[i] = value
cache.done()
cache.merge()
data_dir_1 = tmp_path / "data_1"
data_dir_2 = tmp_path / "data_2"
_write_dataset(data_dir_1, 0)
_write_dataset(data_dir_2, 1)
def _make_dataset(path):
dataset = StreamingDataset(str(path), shuffle=False)
def transform(x, dataset=dataset):
return (x, dataset.current_epoch)
dataset.transform = transform
return dataset
def _make_dataloader(path, policy="error"):
return StreamingDataLoader(_make_dataset(path), batch_size=2, num_workers=0, dataset_change_policy=policy)
class _ValueCheckModel(LightningModule):
def __init__(self, expected_value, expected_epoch=None):
super().__init__()
self.expected_value = expected_value
self.expected_epoch = expected_epoch
self.layer = torch.nn.Linear(1, 1)
def training_step(self, batch, batch_idx):
values, epochs = batch
assert (values == self.expected_value).all().item()
if self.expected_epoch is not None:
assert (epochs == self.expected_epoch).all().item()
loss = self.layer(values.float().unsqueeze(-1)).mean()
return loss
def configure_optimizers(self):
return torch.optim.SGD(self.parameters(), lr=0.1)
ckpt_callback = ModelCheckpoint(dirpath=str(tmp_path), save_last=True)
trainer = Trainer(
max_steps=2,
logger=False,
enable_model_summary=False,
enable_progress_bar=False,
accelerator="cpu",
devices=1,
callbacks=[ckpt_callback],
)
trainer.fit(_ValueCheckModel(expected_value=0), train_dataloaders=_make_dataloader(data_dir_1))
ckpt_path = ckpt_callback.last_model_path
assert ckpt_path
trainer = Trainer(
max_steps=1,
logger=False,
enable_model_summary=False,
enable_progress_bar=False,
enable_checkpointing=False,
accelerator="cpu",
devices=1,
)
trainer.fit(
_ValueCheckModel(expected_value=1, expected_epoch=2),
train_dataloaders=_make_dataloader(data_dir_2, policy="next_epoch"),
ckpt_path=ckpt_path,
)
def test_resume_dataloader_after_some_workers_are_done(tmpdir):
# see https://github.com/Lightning-AI/litData/issues/563
dset_path = tmpdir.join("dataset")
cache = Cache(input_dir=str(dset_path), chunk_size=1)
for i in range(3):
cache[i] = i
cache.done()
cache.merge()
dset = StreamingDataset(str(dset_path), shuffle=False)
dloader = StreamingDataLoader(dset, batch_size=1, num_workers=2, shuffle=False)
# worker 0 is assigned with samples 0 and 1, worker 1 is assigned with sample 2
# the workers alternate, so the expected sequence is [0, 2, 1] and not [0, 1, 2]
expected_sequence = [0, 2, 1]
for i, x in enumerate(dloader):
assert x == expected_sequence[i]
if i == 1:
break
dloader.load_state_dict(dloader.state_dict())
for x in dloader:
assert x == expected_sequence[2]
def simple_transform(samples):
x, y = samples
return x + y
def rng_transform(samples, rng):
x, y = samples
return rng["random"].random() * x, rng["numpy"].random() * y, torch.rand(1, generator=rng["torch"])
@pytest.mark.timeout(120)
@pytest.mark.parametrize("length", [None, 7])
@pytest.mark.parametrize("num_workers", [0, 2])
@pytest.mark.parametrize("transform", [None, simple_transform, rng_transform])
@pytest.mark.skipif(sys.platform in ("win32", "darwin"), reason="too slow in CI")
def test_resume_parallel_dataset(tmp_path, length, num_workers, transform):
dset_paths = [str(tmp_path / f"dataset_{i}") for i in range(2)]
for dset_path in dset_paths:
cache = Cache(input_dir=dset_path, chunk_size=1)
for i in range(10):
cache[i] = i
cache.done()
cache.merge()
dloader = StreamingDataLoader(
ParallelStreamingDataset(
[StreamingDataset(dset_path) for dset_path in dset_paths],
length=length,
transform=transform,
),
num_workers=num_workers,
)
for _ in dloader:
pass
state = dloader.state_dict()
data = []
for x in dloader:
data.append(x)
dloader.load_state_dict(state)
for i, x in enumerate(dloader):
assert x == data[i]
# Define a simple transform function
def transform_fn(x, *args, **kwargs):
"""A simple transform function that doubles the input."""
return x * 2
@pytest.mark.parametrize("shuffle", [True, False])
def test_dataloader_dataset_transform(tmpdir, shuffle):
"""Test if the dataset's transform is applied correctly with dataloader."""
# Create a simple dataset
# Create directories for cache and data
cache_dir = os.path.join(tmpdir, "cache_dir")
data_dir = os.path.join(tmpdir, "data_dir")
os.makedirs(cache_dir)
os.makedirs(data_dir)
# Create a dataset with 100 items, 20 items per chunk
cache = Cache(str(data_dir), chunk_size=20)
for i in range(100):
cache[i] = i
cache.done()
cache.merge()
dataset = StreamingDataset(data_dir, cache_dir=str(cache_dir), shuffle=shuffle, transform=transform_fn)
dataset_length = len(dataset)
assert dataset_length == 100
# ACT
dl = StreamingDataLoader(dataset, batch_size=10, num_workers=2, shuffle=shuffle)
complete_data = []
for batch in dl:
complete_data.extend(batch)
complete_data.sort()
print(f"Complete data: {complete_data}")
# ASSERT
# Verify that the transform is applied correctly
for i, item in enumerate(complete_data):
assert item == i * 2, f"Expected {i * 2}, got {item}"
class StreamingDatasetWithTransform(StreamingDataset):
"""A custom dataset class that inherits from StreamingDataset and applies a transform."""
def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
# Define a simple transform function
def transform(self, x, *args, **kwargs):
"""A simple transform function that doubles the input."""
return x * 2
@pytest.mark.parametrize("shuffle", [True, False])
def test_dataloader_dataset_transform_inheritance(tmpdir, shuffle):
"""Test if the dataset's transform is applied correctly with dataloader."""
# Create a simple dataset
# Create directories for cache and data
cache_dir = os.path.join(tmpdir, "cache_dir")
data_dir = os.path.join(tmpdir, "data_dir")
os.makedirs(cache_dir)
os.makedirs(data_dir)
# Create a dataset with 100 items, 20 items per chunk
cache = Cache(str(data_dir), chunk_size=20)
for i in range(100):
cache[i] = i
cache.done()
cache.merge()
dataset = StreamingDatasetWithTransform(data_dir, cache_dir=str(cache_dir), shuffle=shuffle)
dataset_length = len(dataset)
assert dataset_length == 100
# ACT
dl = StreamingDataLoader(dataset, batch_size=10, num_workers=2, shuffle=shuffle)
complete_data = []
for batch in dl:
complete_data.extend(batch)
complete_data.sort()
print(f"Complete data: {complete_data}")
# ASSERT
# Verify that the transform is applied correctly
for i, item in enumerate(complete_data):
assert item == i * 2, f"Expected {i * 2}, got {item}"
def getter(index: int):
return index
@pytest.mark.skipif(sys.platform == "win32", reason="too slow")
@pytest.mark.parametrize("num_workers", [1, 2])
def test_dataloader_with_align_chunking(tmp_path, num_workers):
output_dir = tmp_path / f"output_workers_{num_workers}"
optimize(
fn=getter,
inputs=list(range(7 * 64)),
chunk_size=64,
output_dir=str(output_dir),
num_workers=num_workers,
align_chunking=True,
)
# Ensure batches contain elements from the same chunk when using align_chunking
dataset = StreamingDataset(str(output_dir), shuffle=True)
# make sure batch_size of dataloader is equal to chunk_size used during optimize
dataloader = StreamingDataLoader(dataset, batch_size=64, num_workers=num_workers, shuffle=True)
for i, batch in enumerate(dataloader):
min_element_in_batch = torch.min(batch).item()
max_element_in_batch = torch.max(batch).item()
assert max_element_in_batch - min_element_in_batch < 64, (
f"Batch {i} contains elements from multiple chunks: min {min_element_in_batch}, max {max_element_in_batch}"
)