Update excluded paths in .fortlsrc

Removed several excluded paths from .fortlsrc configuration.

Author: sbryngelson

.fortlsrc

@@ -8,14 +8,7 @@
     ],
     "excl_paths": [
         "benchmarks/",
-        "examples/",
-        "tests/",
-        "misc/",
-        "src/pre_process/include/2dHardcodedIC.fpp",
-        "src/pre_process/include/3dHardcodedIC.fpp",
-        "src/pre_process/include/ExtrusionHardcodedIC.fpp",
-        "**/m_nvtx*",
-        "**/syscheck.fpp"
+        "examples/"
     ],
     "include_dirs": [
         "src/common/include/",