lint fixes

Author: wilfonba

src/common/m_mpi_common.fpp

@@ -43,7 +43,6 @@ module m_mpi_common
     $:GPU_DECLARE(create='[comm_coords, comm_size]')
     !! Variables for EL bubbles communication
 
-
 #ifndef __NVCOMPILER_GPU_UNIFIED_MEM
     $:GPU_DECLARE(create='[buff_send, buff_recv]')
 #endif

src/simulation/m_bubbles_EL_kernels.fpp

@@ -242,11 +242,11 @@ contains
                 func = dzp/lag_params%charwidth*exp(-0.5_wp*(distance/stddsv)**2._wp)/(sqrt(2._wp*pi)*stddsv)**3._wp
 
                 !do while (Nr_count < Nr - 1._wp + ((mapCells - 1)*1._wp))
-                    !Nr_count = Nr_count + 1._wp
-                    !Lz2 = (center(3) - (dzp*(0.5_wp + Nr_count) - lag_params%charwidth/2._wp))**2._wp
-                    !distance = sqrt((center(1) - nodecoord(1))**2._wp + (center(2) - nodecoord(2))**2._wp + Lz2)
-                    !func = func + &
-                           !dzp/lag_params%charwidth*exp(-0.5_wp*(distance/stddsv)**2._wp)/(sqrt(2._wp*pi)*stddsv)**(3._wp*(strength_idx + 1._wp))
+                !Nr_count = Nr_count + 1._wp
+                !Lz2 = (center(3) - (dzp*(0.5_wp + Nr_count) - lag_params%charwidth/2._wp))**2._wp
+                !distance = sqrt((center(1) - nodecoord(1))**2._wp + (center(2) - nodecoord(2))**2._wp + Lz2)
+                !func = func + &
+                !dzp/lag_params%charwidth*exp(-0.5_wp*(distance/stddsv)**2._wp)/(sqrt(2._wp*pi)*stddsv)**(3._wp*(strength_idx + 1._wp))
                 !end do
             end if
         end if

toolchain/mfc/lint_docs.py

@@ -60,7 +60,7 @@
 }
 
 # Match @ref page_id patterns
-REF_RE = re.compile(r"@ref\s+(\w+)")
+REF_RE = re.compile(r"@ref\s+([\w-]+)")
 
 
 def check_docs(repo_root: Path) -> list[str]:
@@ -373,7 +373,7 @@ def check_page_refs(repo_root: Path) -> list[str]:
     page_ids = {"citelist", "parameters", "case_constraints", "physics_constraints", "examples", "cli-reference"}
     for md_file in doc_dir.glob("*.md"):
         text = md_file.read_text(encoding="utf-8")
-        m = re.search(r"^\s*@page\s+(\w+)", text, flags=re.MULTILINE)
+        m = re.search(r"^\s*@page\s+([\w-]+)", text, flags=re.MULTILINE)
         if m:
             page_ids.add(m.group(1))
 

toolchain/mfc/params/definitions.py

@@ -639,7 +639,7 @@ def get_value_label(param_name: str, value: int) -> str:
 
     # Bubbles
     "bubble_model": {
-        "choices": [1, 2, 3],
+        "choices": [0, 1, 2, 3],
         "value_labels": {0: "Particle", 1: "Gilmore", 2: "Keller-Miksis", 3: "Rayleigh-Plesset"},
     },