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PierreMarzaPierreMarza
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Added dinov3 variants to list of supported models in docs + fixed typos
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‎docs/index.md‎

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@@ -102,7 +102,7 @@ pip install . # install the package
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|SPIDER-Breast | spider_breast | Classif. | 18 | Breast | 224x224 | 20x | 92,892 |
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|SPIDER-Colorectal | spider_colorectal | Classif. | 13 | CRC | 224x224 | 20x | 77,182 |
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|SPIDER-Skin | spider_skin | Classif. | 24 | Skin | 224x224 | 20x | 159,854 |
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|SPIDER-Thorax | spider_thoarx | Classif. | 14 | Thorax | 224x224 | 20x | 78,307 |
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|SPIDER-Thorax | spider_thorax | Classif. | 14 | Thorax | 224x224 | 20x | 78,307 |
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|TCGA CRC-MSI | tcga_crc_msi | Classif. | 2 | CRC | 512x512 | 20x | 51,918 |
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|TCGA TILS | tcga_tils | Classif. | 2 | Multi | 100x100 | 20x | 304,097 |
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|TCGA Uniform | tcga_uniform | Classif. | 32 | Multi | 256x256 | 20x | 271,170 |
@@ -112,35 +112,38 @@ pip install . # install the package
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|SegPath Lymphocytes | segpath_lymphocytes| Segm. | 2 | Multi | 256x256 | 40x | 110,457 |
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## Supported foundation models
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|Name |Benchmark name | Vision arch. | Params. | Training method | VLM | Pathology |
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| :--------------------- | :--------------------: | :----------: | :-----: | :---------------------------------------: | :-: | :-------: |
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|GIGAPATH | provgigapath | ViT-G/14 | 1.1B | DINOv2 | |x |
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|HIBOU-B | hiboub | ViT-B/14 | 86M | DINOv2 | |x |
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|HIBOU-L | hiboul | ViT-L/14 | 307M | DINOv2 | |x |
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|H−OPTIMUS−0 | hoptimus0 | ViT-G/14 | 1.1B | DINOv2 | |x |
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|H0-mini | h0mini | ViT-B/14 | 86M | DINOv2 (teacher: H−OPTIMUS−0) | |x |
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|H−OPTIMUS−1 | hoptimus1 | ViT-G/14 | 1.1B | DINOv2 | |x |
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|KAIKO-S/8 | kaiko_vits8 | ViT-S/8 | 22M | DINO | |x |
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|KAIKO-S/16 | kaiko_vits16 | ViT-S/16 | 22M | DINO | |x |
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|KAIKO-B/8 | kaiko_vitb8 | ViT-B/8 | 86M | DINO | |x |
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|KAIKO-B/16 | kaiko_vitb16 | ViT-B/16 | 86M | DINO | |x |
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|MIDNIGHT | midnight | ViT-G/14 | 1.1B | DINOv2 | |x |
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|OpenMidnight | openmidnight | ViT-G/14 | 1.1B | DINOv2 | |x |
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|PHIKON | phikon | ViT-B/16 | 86M | iBOT | |x |
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|PHIKON2 | phikon2 | ViT-L/16 | 307M | DINOv2 | |x |
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|UNI | uni | ViT-L/16 | 307M | DINOv2 | |x |
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|UNI2-H | uni2h | ViT-H/14 | 681M | DINOv2 | |x |
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|VIRCHOW | virchow | ViT-H/14 | 632M | DINOv2 | |x |
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|VIRCHOW2 | virchow2 | ViT-H/14 | 632M | DINOv2 | |x |
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|CONCH | conch | ViT-B/16 | 86M | CoCa, iBOT |x |x |
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|CONCH 1.5 | titan | ViT-L/16 | 307M | CoCa |x |x |
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|KEEP | keep | ViT-L/16 | 307M | CLIP |x |x |
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|MUSK | musk | V-FFN | 202M | CoCa, BEiT-3 |x |x |
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|PLIP | plip | ViT-B/32 | 86M | CLIP |x |x |
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|QUILTNET | quiltnetb32 | ViT-B/32 | 86M | CLIP |x |x |
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|DINOv2-B | dinov2base | ViT-B/14 | 86M | DINOv2 | | |
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|DINOv2-L | dinov2large | ViTL/14 | 307M | DINOv2 | | |
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|ViT-B/16 | vitbasepatch16224in21k | ViT-B/16 | 86M | Imagenet | | |
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|ViT-L/16 | vitlargepatch16224in21k| ViT-L/16 | 307M | Imagenet | | |
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|CLIP-B/32 | clipvitbasepatch32 | ViT-B/32 | 86M | CLIP |x | |
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|CLIP-L/14 | clipvitlargepatch14 | ViT-L/14 | 307M | CLIP |x | |
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|Name |Benchmark name | Vision arch. | Params. | Training method | VLM | Pathology |
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| :--------------------- | :--------------------------: | :----------: | :-----: | :---------------------------------------: | :-: | :-------: |
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|GIGAPATH | provgigapath | ViT-G/14 | 1.1B | DINOv2 | |x |
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|HIBOU-B | hiboub | ViT-B/14 | 86M | DINOv2 | |x |
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|HIBOU-L | hiboul | ViT-L/14 | 307M | DINOv2 | |x |
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|H−OPTIMUS−0 | hoptimus0 | ViT-G/14 | 1.1B | DINOv2 | |x |
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|H0-mini | h0mini | ViT-B/14 | 86M | DINOv2 (teacher: H−OPTIMUS−0) | |x |
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|H−OPTIMUS−1 | hoptimus1 | ViT-G/14 | 1.1B | DINOv2 | |x |
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|KAIKO-S/8 | kaiko_vits8 | ViT-S/8 | 22M | DINO | |x |
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|KAIKO-S/16 | kaiko_vits16 | ViT-S/16 | 22M | DINO | |x |
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|KAIKO-B/8 | kaiko_vitb8 | ViT-B/8 | 86M | DINO | |x |
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|KAIKO-B/16 | kaiko_vitb16 | ViT-B/16 | 86M | DINO | |x |
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|MIDNIGHT | midnight | ViT-G/14 | 1.1B | DINOv2 | |x |
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|OpenMidnight | openmidnight | ViT-G/14 | 1.1B | DINOv2 | |x |
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|PHIKON | phikon | ViT-B/16 | 86M | iBOT | |x |
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|PHIKON2 | phikon2 | ViT-L/16 | 307M | DINOv2 | |x |
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|UNI | uni | ViT-L/16 | 307M | DINOv2 | |x |
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|UNI2-H | uni2h | ViT-H/14 | 681M | DINOv2 | |x |
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|VIRCHOW | virchow | ViT-H/14 | 632M | DINOv2 | |x |
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|VIRCHOW2 | virchow2 | ViT-H/14 | 632M | DINOv2 | |x |
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|CONCH | conch | ViT-B/16 | 86M | CoCa, iBOT |x |x |
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|CONCH 1.5 | titan | ViT-L/16 | 307M | CoCa |x |x |
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|KEEP | keep | ViT-L/16 | 307M | CLIP |x |x |
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|MUSK | musk | V-FFN | 202M | CoCa, BEiT-3 |x |x |
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|PLIP | plip | ViT-B/32 | 86M | CLIP |x |x |
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|QUILTNET | quiltnetb32 | ViT-B/32 | 86M | CLIP |x |x |
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|DINOv2-B | dinov2base | ViT-B/14 | 86M | DINOv2 | | |
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|DINOv2-L | dinov2large | ViT-L/14 | 307M | DINOv2 | | |
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|DINOv3-S | dinov3vits16pretrainlvd1689m | ViT-S/16 | 22M | DINOv3 | | |
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|DINOv3-B | dinov3vitb16pretrainlvd1689m | ViT-B/16 | 86M | DINOv3 | | |
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|DINOv3-L | dinov3vitl16pretrainlvd1689m | ViT-L/16 | 307M | DINOv3 | | |
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|ViT-B/16 | vitbasepatch16224in21k | ViT-B/16 | 86M | Imagenet | | |
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|ViT-L/16 | vitlargepatch16224in21k | ViT-L/16 | 307M | Imagenet | | |
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|CLIP-B/32 | clipvitbasepatch32 | ViT-B/32 | 86M | CLIP |x | |
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|CLIP-L/14 | clipvitlargepatch14 | ViT-L/14 | 307M | CLIP |x | |

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