fix(mimic-iv): retain device-only rows in oxygen_delivery #59
Workflow file for this run
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| # Post-approval CI for the MIMIC demo builds and derived concepts. | |
| # | |
| # MIMIC-IV: | |
| # psql ─▶ psql-concepts ─┐ | |
| # ├─▶ equivalence | |
| # duckdb ─▶ duckdb-concepts ─┘ | |
| # | |
| # MIMIC-III (the concepts workflows load the demo themselves): | |
| # psql-concepts-iii ─┐ | |
| # ├─▶ equivalence-iii | |
| # duckdb-concepts-iii ─┘ | |
| # | |
| # Runs on PR approval, or when a maintainer clicks "Run workflow" and picks the | |
| # PR's head branch (Actions tab -> CI -> Run workflow). | |
| # Downstream jobs inherit the gate via `needs` | |
| name: CI | |
| on: | |
| pull_request_review: | |
| types: [submitted] | |
| workflow_dispatch: | |
| jobs: | |
| psql: | |
| if: github.event_name == 'workflow_dispatch' || github.event.review.state == 'approved' | |
| uses: ./.github/workflows/build-psql.yml | |
| duckdb: | |
| if: github.event_name == 'workflow_dispatch' || github.event.review.state == 'approved' | |
| uses: ./.github/workflows/build-duckdb.yml | |
| psql-concepts: | |
| needs: psql | |
| uses: ./.github/workflows/concepts-psql.yml | |
| duckdb-concepts: | |
| needs: duckdb | |
| uses: ./.github/workflows/concepts-duckdb.yml | |
| equivalence: | |
| needs: [psql-concepts, duckdb-concepts] | |
| uses: ./.github/workflows/equivalence.yml | |
| psql-concepts-iii: | |
| if: github.event_name == 'workflow_dispatch' || github.event.review.state == 'approved' | |
| uses: ./.github/workflows/concepts-iii-psql.yml | |
| duckdb-concepts-iii: | |
| if: github.event_name == 'workflow_dispatch' || github.event.review.state == 'approved' | |
| uses: ./.github/workflows/concepts-iii-duckdb.yml | |
| equivalence-iii: | |
| needs: [psql-concepts-iii, duckdb-concepts-iii] | |
| uses: ./.github/workflows/equivalence.yml | |
| with: | |
| schema: mimiciii_derived | |
| pg-artifact: psql-derived-iii | |
| pg-dump-file: derived-iii.sql | |
| duckdb-artifact: duckdb-db-iii | |
| db-file: mimic3.db |