PFOCRummage/docker-compose.yaml at main · MaayanLab/PFOCRummage · GitHub

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version: '3.9'
services:
  pfocrummage-app:
    build: .
    platform: linux/amd64
    image: maayanlab/pfocrummage:0.0.12
    x-kubernetes:
      imagePullPolicy: IfNotPresent
      annotations:
        maayanlab.cloud/ingress: https://pfocrummage.maayanlab.cloud
    environment:
      - PUBLIC_URL=https://pfocrummage.maayanlab.cloud
      - DATABASE_URL=postgres://$POSTGRES_USER:$POSTGRES_PASSWORD@pfocrummage-postgres:5432/$POSTGRES_DB
      - AUTHORIZATION_HEADER=$AUTHORIZATION_HEADER
      - NODE_ENV=production
      - ENRICH_URL=http://pfocrummage-enrich:8000
      - NEXT_PUBLIC_GA_MEASUREMENT_ID=$NEXT_PUBLIC_GA_MEASUREMENT_ID
    ports:
      - 3000:3000
  pfocrummage-enrich:
    build: enrich
    platform: linux/amd64
    image: maayanlab/pfocrummage-enrich:0.1.0
    x-kubernetes:
      imagePullPolicy: IfNotPresent
    environment:
      - 'ROCKET_DATABASES={postgres={url="postgres://${POSTGRES_USER}:${POSTGRES_PASSWORD}@pfocrummage-postgres:5432/${POSTGRES_DB}"}}'
    ports:
      - 8000:8000
  pfocrummage-postgres:
    build: db
    platform: linux/amd64
    image: maayanlab/pfocrummage-postgres:0.0.1
    x-kubernetes:
      imagePullPolicy: IfNotPresent
    environment:
      - POSTGRES_DB
      - POSTGRES_USER
      - POSTGRES_PASSWORD
      - ENRICH_URL=http://pfocrummage-enrich:8000
    ports:
      - 5432:5432
    volumes:
      - pfocrummage-data:/var/lib/postgresql/data
  pfocrummage-bot:
    build: bot
    platform: linux/amd64
    image: maayanlab/pfocrummage-bot:0.0.1
    x-kubernetes:
      imagePullPolicy: IfNotPresent
    command: ["bash", "-c", "cd /work/data && touch log && tail -f log"]
    environment:
      - DATABASE_URL=postgres://${POSTGRES_USER}:${POSTGRES_PASSWORD}@pfocrummage-postgres:5432/${POSTGRES_DB}
      - ENRICH_URL=http://pfocrummage-enrich:8000
      - API_KEY
      - EMAIL
    labels:
      ofelia.enabled: "true"
      # 0 second
      # 0 minute
      # 9 hour
      # * day of month
      # * month of year
      # 1 day of week (monday)
      ofelia.job-exec.update-db.schedule: "0 8 21 * *"
      ofelia.job-exec.update-db.command: "/bin/sh -c '/work/bot.sh > /work/data/log 2> /work/data/log'"

volumes:
  pfocrummage-data:
    x-kubernetes:
      size: 20Gi
      class: gp2


x-kubernetes:
  name: pfocrummage
  namespace: pfocrummage