Decrease minimal cmake version by substituting copy_directory_if_different with copy_directory

asmelko · asmelko · commit 0f66fc5963d0 · 2025-12-11T14:05:41.000+01:00
diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -1,4 +1,4 @@
-cmake_minimum_required(VERSION 3.26)
+cmake_minimum_required(VERSION 3.12)
 project(
   PhysiCell
   LANGUAGES CXX
diff --git a/sample_projects/CMakeLists-default.txt b/sample_projects/CMakeLists-default.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/asymmetric_division/CMakeLists.txt b/sample_projects/asymmetric_division/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/biorobots/CMakeLists.txt b/sample_projects/biorobots/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/cancer_biorobots/CMakeLists.txt b/sample_projects/cancer_biorobots/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/cancer_immune/CMakeLists.txt b/sample_projects/cancer_immune/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/celltypes3/CMakeLists.txt b/sample_projects/celltypes3/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/custom_division/CMakeLists.txt b/sample_projects/custom_division/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/episode/CMakeLists.txt b/sample_projects/episode/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/heterogeneity/CMakeLists.txt b/sample_projects/heterogeneity/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/immune_function/CMakeLists.txt b/sample_projects/immune_function/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/interactions/CMakeLists.txt b/sample_projects/interactions/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/mechano/CMakeLists.txt b/sample_projects/mechano/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/physimess/CMakeLists.txt b/sample_projects/physimess/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/pred_prey_farmer/CMakeLists.txt b/sample_projects/pred_prey_farmer/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/rules_sample/CMakeLists.txt b/sample_projects/rules_sample/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/template/CMakeLists.txt b/sample_projects/template/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/virus_macrophage/CMakeLists.txt b/sample_projects/virus_macrophage/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects/worm/CMakeLists.txt b/sample_projects/worm/CMakeLists.txt
@@ -14,5 +14,5 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
diff --git a/sample_projects_intracellular/boolean/cancer_invasion/CMakeLists.txt b/sample_projects_intracellular/boolean/cancer_invasion/CMakeLists.txt
@@ -15,7 +15,7 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/../..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
 
 target_link_libraries(${project} PRIVATE PhysiBoSS)
diff --git a/sample_projects_intracellular/boolean/physiboss_cell_lines/CMakeLists.txt b/sample_projects_intracellular/boolean/physiboss_cell_lines/CMakeLists.txt
@@ -15,7 +15,7 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/../..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
 
 target_link_libraries(${project} PRIVATE PhysiBoSS)
diff --git a/sample_projects_intracellular/boolean/template_BM/CMakeLists.txt b/sample_projects_intracellular/boolean/template_BM/CMakeLists.txt
@@ -15,7 +15,7 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/../..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
 
 target_link_libraries(${project} PRIVATE PhysiBoSS_256n)
diff --git a/sample_projects_intracellular/boolean/tutorial/CMakeLists.txt b/sample_projects_intracellular/boolean/tutorial/CMakeLists.txt
@@ -15,7 +15,7 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/../..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
 
 target_link_libraries(${project} PRIVATE PhysiBoSS_128n)
diff --git a/sample_projects_intracellular/fba/cancer_metabolism/CMakeLists.txt b/sample_projects_intracellular/fba/cancer_metabolism/CMakeLists.txt
@@ -15,7 +15,7 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/../..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
 
 target_link_libraries(${project} PRIVATE dFBA)
diff --git a/sample_projects_intracellular/fba/ecoli_acetic_switch/CMakeLists.txt b/sample_projects_intracellular/fba/ecoli_acetic_switch/CMakeLists.txt
@@ -15,7 +15,7 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/../..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
 
 target_link_libraries(${project} PRIVATE dFBA)
diff --git a/sample_projects_intracellular/ode/ode_energy/CMakeLists.txt b/sample_projects_intracellular/ode/ode_energy/CMakeLists.txt
@@ -15,7 +15,7 @@ target_include_directories(${project} PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/../..)
 add_custom_command(
   TARGET ${project}
   POST_BUILD
-  COMMAND ${CMAKE_COMMAND} -E copy_directory_if_different
+  COMMAND ${CMAKE_COMMAND} -E copy_directory
           ${CMAKE_CURRENT_SOURCE_DIR}/config ${CMAKE_CURRENT_BINARY_DIR}/config)
 
 target_link_libraries(${project} PRIVATE libRoadrunner)

Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`		`-cmake_minimum_required(VERSION 3.26)`
	`1`	`+cmake_minimum_required(VERSION 3.12)`
`2`	`2`	`project(`
`3`	`3`	`PhysiCell`
`4`	`4`	`LANGUAGES CXX`