📝 fix typos

Author: Kevin Cazelles

README.md

@@ -54,11 +54,11 @@ You should now be ready to reproduce the analysis.
 - `basic_omnivory_module.jl`: includes all basic building blocs including the basic set of ODEs (`model!()`) and the functions to compute the different metrics (e.g. `overshoot()`);
 - `pulse.jl`: functions to run pulse analysis;
 - `press.jl`: functions to run press analysis;
-- `fig_press.jl`: script to create pulse figures (Figs. 3 (a-c), 4 (a-c), S3 (a-c), S4 (a-c));
-- `fig_pulse.jl`: script to create press figures (Figs. 3 (d-f), 4 (d-f), S3 (d-f), S4 (d-f));
+- `fig_press.jl`: script to create pulse figure panels (Figs. 3 (a-c), 4 (a-c), S3 (a-c), S4 (a-c));
+- `fig_pulse.jl`: script to create press figure panels (Figs. 3 (d-f), 4 (d-f), S3 (d-f), S4 (d-f));
 - `fig_S1.jl`: script to create figure S1;
-- `fig_S2.jl`: script to create figure S2.
-- `pipeline.jl`: orchestrate the different scripts to reproduce the analysis.
+- `fig_S2.jl`: script to create figure S2;
+- `pipeline.jl`: orchestrates the different scripts to reproduce the analysis.
 
 
 ## How to reproduce the analysis locally
@@ -71,7 +71,7 @@ julia src/pipeline.jl
 
 
 
-## Questions 
+## Questions?
 
-Script have been commented for ease of comprehension but if you still have some questions regarding the numerical implementation, do not hesitate to open an issue.
+Scripts have been commented for ease of comprehension but if you still have some questions regarding the numerical implementation, do not hesitate to create an issue.
 

src/fig_S1.jl

@@ -3,6 +3,7 @@ include("pulse.jl")
 using PyPlot
 pygui(true)
 
+# PRESS SIMULATIONS for ranges of K, aCP, eCP and mP.
 
 # range of K
 println("Simulations for a range of K values")

src/fig_S2.jl

@@ -3,7 +3,7 @@ include("press.jl")
 using PyPlot
 pygui(true)
 
-
+# PULSE SIMULATIONS for ranges of K, aCP, eCP and mP.
 
 # range of K
 println("Simulations for a range of K values")

src/pipeline.jl

@@ -1,4 +1,6 @@
-# Install packagess
+# Orchestrates scripts
+
+# Install packages
 printstyled("1. Installing packages\n", color = :blue)
 include("install_packages.jl")
 

src/press.jl

@@ -1,6 +1,6 @@
 using DifferentialEquations, NLsolve
 
-# analysis for one press simulation (1 system)
+# Full analysis for one press simulation (1 system)
 function press_unit(par, p_strength) 
     # Parameters
     u0 = [1.0, 1.5, 1.5]

src/pulse.jl

@@ -1,7 +1,6 @@
-# Simulation for pulse experiment
 using DifferentialEquations, NLsolve
 
-# analysis for one pulse simulation (1 system)
+# Entire analysis for one pulse simulation (1 system)
 function pulse_unit(par, p_length, p_strength) 
     # Parameters   
     u0 = [1.0, 1.5, 1.5]