update apply_macros

Author: james-bruten-mo

lfric_macros/apply_macros.py

@@ -1092,7 +1092,11 @@ def apps_to_upgrade(self) -> list[Path]:
         for app_path in apps_list:
             # Ignore lfric_coupled_rivers as this is based on Jules-standalone
             # metadata which is not currently available
-            if "fcm_make" in str(app_path) or "lfric_coupled_rivers" in str(app_path):
+            if (
+                "fcm_make" in str(app_path)
+                or "lfric_coupled_rivers" in str(app_path)
+                or "coupled_rivers" in str(app_path)
+            ):
                 continue
             if not app_path.is_dir():
                 continue