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Use theta perturbation parameters from namelist #375

@Adrian-Lock

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#374

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The initial random perturbations used in idealised simulations to initiate fine scale motion are hardwired in the code. Here we switch to reading them from the initial_temperature namelist so they can be varied in magnitude (theta_pert_size) and location in the vertical (between the heights theta_pert_start and theta_pert_end).

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