Correct y placement of cells

pgleeson · pgleeson · commit f279c515bb3e · 2025-08-22T16:08:37.000+01:00
Fix for #794 - needs to be checked on more models...
diff --git a/netpyne_ui/netpyne_model_interpreter.py b/netpyne_ui/netpyne_model_interpreter.py
@@ -98,7 +98,7 @@ def extractPopulations(self, netpyne_model, netpyne_geppetto_library):
                     index=len(populations[cell['tags']['pop']].defaultValue.elements),
                     position=Point(
                         x=float(cell['tags']['x'] * netpyne_model.net.params.cellsVisualizationSpacingMultiplier[0]),
-                        y=-float(cell['tags']['y'] * netpyne_model.net.params.cellsVisualizationSpacingMultiplier[1]),
+                        y=float(cell['tags']['y'] * netpyne_model.net.params.cellsVisualizationSpacingMultiplier[1]),
                         z=float(cell['tags']['z'] * netpyne_model.net.params.cellsVisualizationSpacingMultiplier[2])
                     )
                 )

Original file line number	Diff line number	Diff line change
`@@ -98,7 +98,7 @@ def extractPopulations(self, netpyne_model, netpyne_geppetto_library):`
`98`	`98`	`index=len(populations[cell['tags']['pop']].defaultValue.elements),`
`99`	`99`	`position=Point(`
`100`	`100`	`x=float(cell['tags']['x'] * netpyne_model.net.params.cellsVisualizationSpacingMultiplier[0]),`
`101`		`- y=-float(cell['tags']['y'] * netpyne_model.net.params.cellsVisualizationSpacingMultiplier[1]),`
	`101`	`+ y=float(cell['tags']['y'] * netpyne_model.net.params.cellsVisualizationSpacingMultiplier[1]),`
`102`	`102`	`z=float(cell['tags']['z'] * netpyne_model.net.params.cellsVisualizationSpacingMultiplier[2])`
`103`	`103`	`)`
`104`	`104`	`)`