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Matteo Cantarelli edited this page Feb 26, 2018 · 28 revisions

Welcome to the NetPyNE-UI wiki!

NetPyNE (www.netpyne.org) is a high-level Python interface to NEURON that facilitates the development, parallel simulation and analysis of biological neuronal networks. NetPyNE-UI is a simple user interface that can be used to control NetPyNE in a graphical environment. The UI splits the workflows in three tabs available at the top of the screen: network definition, network exploration and network simulation and analysis.

From the first tab it is possible to define the network and all the rules that will be used for its generation. Network definition comprises 6 different sections:

  • Populations
  • Cell Rules
  • Synapses
  • Connectivity Rules
  • Stimulation sources
  • Stimulation targets
  • Configuration

At the bottom of the screen two consoles, a Javascript and a Python one, will let you interact programmatically with the environment. In particular through the Python console it is possible to interact interactively with the NetPyNE model. Any changes made through the Python console will reflect immediately to the UI and vice versa.

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